AIMC Topic: Databases, Factual

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Training Convolutional Neural Networks and Compressed Sensing End-to-End for Microscopy Cell Detection.

IEEE transactions on medical imaging
Automated cell detection and localization from microscopy images are significant tasks in biomedical research and clinical practice. In this paper, we design a new cell detection and localization algorithm that combines deep convolutional neural netw...

IVS2vec: A tool of Inverse Virtual Screening based on word2vec and deep learning techniques.

Methods (San Diego, Calif.)
Inverse Virtual Screening is a powerful technique in the early stage of drug discovery process. This technique can provide important clues for biologically active molecules, which is useful in the following researches of durg discovery. In this work,...

Fast and fully-automated detection and segmentation of pulmonary nodules in thoracic CT scans using deep convolutional neural networks.

Computerized medical imaging and graphics : the official journal of the Computerized Medical Imaging Society
Deep learning techniques have been extensively used in computerized pulmonary nodule analysis in recent years. Many reported studies still utilized hybrid methods for diagnosis, in which convolutional neural networks (CNNs) are used only as one part ...

A Novel Weakly Supervised Multitask Architecture for Retinal Lesions Segmentation on Fundus Images.

IEEE transactions on medical imaging
Obtaining the complete segmentation map of retinal lesions is the first step toward an automated diagnosis tool for retinopathy that is interpretable in its decision-making. However, the limited availability of ground truth lesion detection maps at a...

CNNs for automatic glaucoma assessment using fundus images: an extensive validation.

Biomedical engineering online
BACKGROUND: Most current algorithms for automatic glaucoma assessment using fundus images rely on handcrafted features based on segmentation, which are affected by the performance of the chosen segmentation method and the extracted features. Among ot...

MTBI Identification From Diffusion MR Images Using Bag of Adversarial Visual Features.

IEEE transactions on medical imaging
In this paper, we propose bag of adversarial features (BAFs) for identifying mild traumatic brain injury (MTBI) patients from their diffusion magnetic resonance images (MRIs) (obtained within one month of injury) by incorporating unsupervised feature...

Contemporary pharmacogenetic assays in view of the PharmGKB database.

Pharmacogenomics
AIM: Six modern PGx assays were compared with the Pharmacogenomics Knowledge Base (PharmGKB) to determine the proportion of the currently known PGx genotypes that are assessed by these assays.

Machine learning to predict occult nodal metastasis in early oral squamous cell carcinoma.

Oral oncology
OBJECTIVES: To develop and validate an algorithm to predict occult nodal metastasis in clinically node negative oral cavity squamous cell carcinoma (OCSCC) using machine learning. To compare algorithm performance to a model based on tumor depth of in...

A Generic Human-Machine Annotation Framework Based on Dynamic Cooperative Learning.

IEEE transactions on cybernetics
The task of obtaining meaningful annotations is a tedious work, incurring considerable costs and time consumption. Dynamic active learning and cooperative learning are recently proposed approaches to reduce human effort of annotating data with subjec...