AIMC Topic: Databases, Factual

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Where, why, and how is bias learned in medical image analysis models? A study of bias encoding within convolutional networks using synthetic data.

EBioMedicine
BACKGROUND: Understanding the mechanisms of algorithmic bias is highly challenging due to the complexity and uncertainty of how various unknown sources of bias impact deep learning models trained with medical images. This study aims to bridge this kn...

Enhancing Thyroid Pathology With Artificial Intelligence: Automated Data Extraction From Electronic Health Reports Using RUBY.

JCO clinical cancer informatics
PURPOSE: Thyroid nodules are common in the general population, and assessing their malignancy risk is the initial step in care. Surgical exploration remains the sole definitive option for indeterminate nodules. Extensive database access is crucial fo...

Generative Biomedical Event Extraction With Constrained Decoding Strategy.

IEEE/ACM transactions on computational biology and bioinformatics
Currently, biomedical event extraction has received considerable attention in various fields, including natural language processing, bioinformatics, and computational biomedicine. This has led to the emergence of numerous machine learning and deep le...

Relation Extraction in Biomedical Texts: A Cross-Sentence Approach.

IEEE/ACM transactions on computational biology and bioinformatics
Relation extraction, a crucial task in understanding the intricate relationships between entities in biomedical domains, has predominantly focused on binary relations within single sentences. However, in practical biomedical scenarios, relationships ...

Contrasting Multi-Source Temporal Knowledge Graphs for Biomedical Hypothesis Generation.

IEEE/ACM transactions on computational biology and bioinformatics
Hypothesis Generation (HG) aims to expedite biomedical researches by generating novel hypotheses from existing scientific literature. Most existing studies focused on modeling static snapshots of the corpus, neglecting the temporal evolution of scien...

Integrating K+ Entities Into Coreference Resolution on Biomedical Texts.

IEEE/ACM transactions on computational biology and bioinformatics
Biomedical Coreference Resolution focuses on identifying the coreferences in biomedical texts, which normally consists of two parts: (i) mention detection to identify textual representation of biological entities and (ii) finding their coreference li...

Joint Extraction of Biomedical Events Based on Dynamic Path Planning Strategy and Hybrid Neural Network.

IEEE/ACM transactions on computational biology and bioinformatics
Biomedical event detection is a pivotal information extraction task in molecular biology and biomedical research, which provides inspiration for the medical search, disease prevention, and new drug development. The existing methods usually detect sim...

Graph Convolutional Network With Self-Supervised Learning for Brain Disease Classification.

IEEE/ACM transactions on computational biology and bioinformatics
Brain functional network (BFN) analysis has become a popular method for identifying neurological diseases at their early stages and revealing sensitive biomarkers related to these diseases. Due to the fact that BFN is a graph with complex structure, ...

Distantly Supervised Biomedical Relation Extraction via Negative Learning and Noisy Student Self-Training.

IEEE/ACM transactions on computational biology and bioinformatics
Biomedical relation extraction aims to identify underlying relationships among entities, such as gene associations and drug interactions, within biomedical texts. Despite advancements in relation extraction in general knowledge domains, the scarcity ...

Predicting Early Hospital Discharge Following Revision Total Hip Arthroplasty: An Analysis of a Large National Database Using Machine Learning.

The Journal of arthroplasty
BACKGROUND: Revision total hip arthroplasty (rTHA) was recently removed from the Medicare inpatient-only list. However, appropriate candidate selection for outpatient rTHA remains paramount. The purpose of this study was to evaluate the utility of a ...