AIMC Topic: Metabolome
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Metabolomics and machine learning identify urine metabolic characteristics and potential biomarkers for severe Mycoplasma pneumoniae pneumonia.
Scientific reports
May 16, 2025
To study the differences in the urine metabolome between pediatric patients with severe Mycoplasma pneumoniae pneumonia (SMPP) and those with general Mycoplasma pneumoniae pneumonia (GMPP) via non-targeted metabolomics method, and potential biomarker...
M-GNN: A Graph Neural Network Framework for Lung Cancer Detection Using Metabolomics and Heterogeneous Graph Modeling.
International journal of molecular sciences
May 13, 2025
Lung cancer remains the leading cause of cancer-related mortality worldwide, with early detection critical for improving survival rates, yet conventional methods like CT scans often yield high false-positive rates. This study introduces M-GNN, a grap...
Metabolomic Plasma Profile of Chronic Obstructive Pulmonary Disease Patients.
International journal of molecular sciences
May 9, 2025
The analysis of blood metabolites may help identify individuals at risk of having COPD and offer insights into its underlying pathophysiology. This study aimed to identify COPD-related metabolic alterations and generate a biological signature potenti...
Metabolomic profiles underlying gout flares: a prospective study of people with gout.
RMD open
May 8, 2025
OBJECTIVES: To identify specific metabolomic profiles associated with gout flares in people with gout.
Predicting Sprint Potential: A Machine Learning Model Based on Blood Metabolite Profiles in Young Male Athletes.
European journal of sport science
Mar 1, 2025
This study aims to utilize male blood metabolite signatures for (i) distinguishing between healthy individuals and athletes, thereby optimizing the athlete screening process; and (ii) predicting athletic performance in 100, 200, and 400 m sprints, en...
The Metabolic Treatabolome and Inborn Errors of Metabolism Knowledgebase therapy tool: Do not miss the opportunity to treat!
Journal of inherited metabolic disease
Jan 1, 2025
Inborn errors of metabolism (IEMs) are rare genetic conditions with significant morbidity and mortality. Technological advances have increased therapeutic options, making it challenging to remain up to date. A centralized therapy knowledgebase is nee...
Development of a Serum Metabolome-Based Test for Early-Stage Detection of Multiple Cancers.
Cancer reports (Hoboken, N.J.)
Nov 1, 2024
BACKGROUND: Detection of cancer at the early stage currently offers the only viable strategy for reducing disease-related morbidity and mortality. Various approaches for multi-cancer early detection are being explored, which largely rely on capturing...
An Ensemble Spectral Prediction (ESP) model for metabolite annotation.
Bioinformatics (Oxford, England)
Aug 2, 2024
MOTIVATION: A key challenge in metabolomics is annotating measured spectra from a biological sample with chemical identities. Currently, only a small fraction of measurements can be assigned identities. Two complementary computational approaches have...
MACC: a visual interactive knowledgebase of metabolite-associated cell communications.
Nucleic acids research
Jan 5, 2024
Metabolite-associated cell communications play critical roles in maintaining the normal biological function of human through coordinating cells, organs and physiological systems. Though substantial information of MACCs has been continuously reported,...
An integrated deep learning framework for the interpretation of untargeted metabolomics data.
Briefings in bioinformatics
Jul 20, 2023
Untargeted metabolomics is gaining widespread applications. The key aspects of the data analysis include modeling complex activities of the metabolic network, selecting metabolites associated with clinical outcome and finding critical metabolic pathw...
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