AIMC Topic: Natural Language Processing

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Prospective validation of a machine learning model that uses provider notes to identify candidates for resective epilepsy surgery.

Epilepsia
OBJECTIVE: Delay to resective epilepsy surgery results in avoidable disease burden and increased risk of mortality. The objective was to prospectively validate a natural language processing (NLP) application that uses provider notes to assign epileps...

SemBioNLQA: A semantic biomedical question answering system for retrieving exact and ideal answers to natural language questions.

Artificial intelligence in medicine
BACKGROUND AND OBJECTIVE: Question answering (QA), the identification of short accurate answers to users questions written in natural language expressions, is a longstanding issue widely studied over the last decades in the open-domain. However, it s...

Latent Dirichlet Allocation in predicting clinical trial terminations.

BMC medical informatics and decision making
BACKGROUND: This study used natural language processing (NLP) and machine learning (ML) techniques to identify reliable patterns from within research narrative documents to distinguish studies that complete successfully, from the ones that terminate....

Learning a functional grammar of protein domains using natural language word embedding techniques.

Proteins
In this paper, using Word2vec, a widely-used natural language processing method, we demonstrate that protein domains may have a learnable implicit semantic "meaning" in the context of their functional contributions to the multi-domain proteins in whi...

Automated content analysis across six languages.

PloS one
Corpus selection bias in international relations research presents an epistemological problem: How do we know what we know? Most social science research in the field of text analytics relies on English language corpora, biasing our ability to underst...

EXTraction of EMR numerical data: an efficient and generalizable tool to EXTEND clinical research.

BMC medical informatics and decision making
BACKGROUND: Electronic medical records (EMR) contain numerical data important for clinical outcomes research, such as vital signs and cardiac ejection fractions (EF), which tend to be embedded in narrative clinical notes. In current practice, this da...

Assessing the accuracy of machine-assisted abstract screening with DistillerAI: a user study.

Systematic reviews
BACKGROUND: Web applications that employ natural language processing technologies to support systematic reviewers during abstract screening have become more common. The goal of our project was to conduct a case study to explore a screening approach t...

Gene expression based survival prediction for cancer patients-A topic modeling approach.

PloS one
Cancer is one of the leading cause of death, worldwide. Many believe that genomic data will enable us to better predict the survival time of these patients, which will lead to better, more personalized treatment options and patient care. As standard ...

Extractive single document summarization using binary differential evolution: Optimization of different sentence quality measures.

PloS one
With the increase in the amount of text information in different real-life applications, automatic text-summarization systems become more predominant in extracting relevant information. In the current study, we formulated the problem of extractive te...

Fuzzy cognitive maps (FCMs) for the analysis of team communication.

Applied ergonomics
Communication in teams plays a vital role in team success. This work proposes Fuzzy Cognitive Maps (FCMs) as a formalized, team communication methodology for the analysis of content and flow, simultaneously, of naturalistic team communication in a st...