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Machine learning based refined differential gene expression analysis of pediatric sepsis.

BMC medical genomics
BACKGROUND: Differential expression (DE) analysis of transcriptomic data enables genome-wide analysis of gene expression changes associated with biological conditions of interest. Such analysis often provides a wide list of genes that are differentia...

HybridSucc: A Hybrid-learning Architecture for General and Species-specific Succinylation Site Prediction.

Genomics, proteomics & bioinformatics
As an important protein acylation modification, lysine succinylation (Ksucc) is involved in diverse biological processes, and participates in human tumorigenesis. Here, we collected 26,243 non-redundant known Ksucc sites from 13 species as the benchm...

Evaluation of Hemodialysis Arteriovenous Bruit by Deep Learning.

Sensors (Basel, Switzerland)
Physical findings of auscultation cannot be quantified at the arteriovenous fistula examination site during daily dialysis treatment. Consequently, minute changes over time cannot be recorded based only on subjective observations. In this study, we s...

Computer-Aided System for the Detection of Multicategory Pulmonary Tuberculosis in Radiographs.

Journal of healthcare engineering
The early screening and diagnosis of tuberculosis plays an important role in the control and treatment of tuberculosis infections. In this paper, an integrated computer-aided system based on deep learning is proposed for the detection of multiple cat...

Machine learning models predicting multidrug resistant urinary tract infections using "DsaaS".

BMC bioinformatics
BACKGROUND: The scope of this work is to build a Machine Learning model able to predict patients risk to contract a multidrug resistant urinary tract infection (MDR UTI) after hospitalization. To achieve this goal, we used different popular Machine L...

Identifying disease trajectories with predicate information from a knowledge graph.

Journal of biomedical semantics
BACKGROUND: Knowledge graphs can represent the contents of biomedical literature and databases as subject-predicate-object triples, thereby enabling comprehensive analyses that identify e.g. relationships between diseases. Some diseases are often dia...

The FUTUREPAIN study: Validating a questionnaire to predict the probability of having chronic pain 7-10 years into the future.

PloS one
OBJECTIVES: The FUTUREPAIN study develops a short general-purpose questionnaire, based on the biopsychosocial model, to predict the probability of developing or maintaining moderate-to-severe chronic pain 7-10 years into the future.