AIMC Topic: Animals

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DDeep3M: Docker-powered deep learning for biomedical image segmentation.

Journal of neuroscience methods
BACKGROUND: Deep learning models are turning out to be increasingly popular in biomedical image processing. The fruitful utilization of these models, in most cases, is substantially restricted by the complicated configuration of computational environ...

Supervised Machine Learning for Semi-Quantification of Extracellular DNA in Glomerulonephritis.

Journal of visualized experiments : JoVE
Glomerular cell death is a pathological feature of myeloperoxidase anti neutrophil cytoplasmic antibody associated vasculitis (MPO-AAV). Extracellular deoxyribonucleic acid (ecDNA) is released during different forms of cell death including apoptosis,...

An autoencoder and artificial neural network-based method to estimate parity status of wild mosquitoes from near-infrared spectra.

PloS one
After mating, female mosquitoes need animal blood to develop their eggs. In the process of acquiring blood, they may acquire pathogens, which may cause different diseases in humans such as malaria, zika, dengue, and chikungunya. Therefore, knowing th...

A comparative analysis of saponin-enriched fraction from (Moench) Garcke, (Gaertn) and (Santapau and Fernandes): an hemolytic and cytotoxicity evaluation.

Animal biotechnology
To explore the newer saponin resources, toxicity of saponin-enriched fraction (SEF) extracted from (SV) was evaluated for first time and compared with toxicity of SEF extracted from (SM) and (CV). All extracted SEF from diverse resources were cha...

The application of machine learning techniques to innovative antibacterial discovery and development.

Expert opinion on drug discovery
INTRODUCTION: After the initial wave of antibiotic discovery, few novel classes of antibiotics have emerged, with the latest dating back to the 1980's. Furthermore, the pace of antibiotic drug discovery is unable to keep up with the increasing preval...

Development of Deep Learning Models for Predicting the Effects of Exposure to Engineered Nanomaterials on Daphnia magna.

Small (Weinheim an der Bergstrasse, Germany)
This study presents the results of applying deep learning methodologies within the ecotoxicology field, with the objective of training predictive models that can support hazard assessment and eventually the design of safer engineered nanomaterials (E...

Unsupervised generative and graph representation learning for modelling cell differentiation.

Scientific reports
Using machine learning techniques to build representations from biomedical data can help us understand the latent biological mechanism of action and lead to important discoveries. Recent developments in single-cell RNA-sequencing protocols have allow...

KAML: improving genomic prediction accuracy of complex traits using machine learning determined parameters.

Genome biology
Advances in high-throughput sequencing technologies have reduced the cost of genotyping dramatically and led to genomic prediction being widely used in animal and plant breeding, and increasingly in human genetics. Inspired by the efficient computing...

The proteome landscape of the kingdoms of life.

Nature
Proteins carry out the vast majority of functions in all biological domains, but for technological reasons their large-scale investigation has lagged behind the study of genomes. Since the first essentially complete eukaryotic proteome was reported, ...