AIMC Topic: Deep Learning

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Detection of glaucomatous optic neuropathy with spectral-domain optical coherence tomography: a retrospective training and validation deep-learning analysis.

The Lancet. Digital health
BACKGROUND: Spectral-domain optical coherence tomography (SDOCT) can be used to detect glaucomatous optic neuropathy, but human expertise in interpretation of SDOCT is limited. We aimed to develop and validate a three-dimensional (3D) deep-learning s...

Deep Learning: The Good, the Bad, and the Ugly.

Annual review of vision science
Artificial vision has often been described as one of the key remaining challenges to be solved before machines can act intelligently. Recent developments in a branch of machine learning known as deep learning have catalyzed impressive gains in machin...

Digital whole-slide image analysis for automated diatom test in forensic cases of drowning using a convolutional neural network algorithm.

Forensic science international
Diatom examinations have been widely used to perform drowning diagnosis in forensic practice. However, current methods for recognizing diatoms, which use light or electron microscopy, are time-consuming and laborious and often result in false positiv...

Cross-registry neural domain adaptation to extract mutational test results from pathology reports.

Journal of biomedical informatics
OBJECTIVE: We study the performance of machine learning (ML) methods, including neural networks (NNs), to extract mutational test results from pathology reports collected by cancer registries. Given the lack of hand-labeled datasets for mutational te...

Past-future information bottleneck for sampling molecular reaction coordinate simultaneously with thermodynamics and kinetics.

Nature communications
The ability to rapidly learn from high-dimensional data to make reliable bets about the future is crucial in many contexts. This could be a fly avoiding predators, or the retina processing gigabytes of data to guide human actions. In this work we dra...

HetEnc: a deep learning predictive model for multi-type biological dataset.

BMC genomics
BACKGROUND: Researchers today are generating unprecedented amounts of biological data. One trend in current biological research is integrated analysis with multi-platform data. Effective integration of multi-platform data into the solution of a singl...

Cardiac arrhythmia detection using deep learning: A review.

Journal of electrocardiology
Due to its simplicity and low cost, analyzing an electrocardiogram (ECG) is the most common technique for detecting cardiac arrhythmia. The massive amount of ECG data collected every day, in home and hospital, may preclude data review by human operat...

Cytokeratin-Supervised Deep Learning for Automatic Recognition of Epithelial Cells in Breast Cancers Stained for ER, PR, and Ki-67.

IEEE transactions on medical imaging
Immunohistochemistry (IHC) of ER, PR, and Ki-67 are routinely used assays in breast cancer diagnostics. Determination of the proportion of stained cells (labeling index) should be restricted on malignant epithelial cells, carefully avoiding tumor inf...

Deep learning how to fit an intravoxel incoherent motion model to diffusion-weighted MRI.

Magnetic resonance in medicine
PURPOSE: This prospective clinical study assesses the feasibility of training a deep neural network (DNN) for intravoxel incoherent motion (IVIM) model fitting to diffusion-weighted MRI (DW-MRI) data and evaluates its performance.