AIMC Topic: Electronic Health Records

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Comparing information extraction techniques for low-prevalence concepts: The case of insulin rejection by patients.

Journal of biomedical informatics
OBJECTIVE: To comparatively evaluate a range of Natural Language Processing (NLP) approaches for Information Extraction (IE) of low-prevalence concepts in clinical notes on the example of decline of insulin therapy recommendation by patients.

Deep representation learning for individualized treatment effect estimation using electronic health records.

Journal of biomedical informatics
Utilizing clinical observational data to estimate individualized treatment effects (ITE) is a challenging task, as confounding inevitably exists in clinical data. Most of the existing models for ITE estimation tackle this problem by creating unbiased...

Identification of postoperative complications using electronic health record data and machine learning.

American journal of surgery
BACKGROUND: Using the American College of Surgeons National Surgical Quality Improvement Program (NSQIP) complication status of patients who underwent an operation at the University of Colorado Hospital, we developed a machine learning algorithm for ...

A systematic review of natural language processing for classification tasks in the field of incident reporting and adverse event analysis.

International journal of medical informatics
CONTEXT: Adverse events in healthcare are often collated in incident reports which contain unstructured free text. Learning from these events may improve patient safety. Natural language processing (NLP) uses computational techniques to interrogate f...

Aggregating the syntactic and semantic similarity of healthcare data towards their transformation to HL7 FHIR through ontology matching.

International journal of medical informatics
BACKGROUND AND OBJECTIVE: Healthcare systems deal with multiple challenges in releasing information from data silos, finding it almost impossible to be implemented, maintained and upgraded, with difficulties ranging in the technical, security and hum...

A frame semantic overview of NLP-based information extraction for cancer-related EHR notes.

Journal of biomedical informatics
OBJECTIVE: There is a lot of information about cancer in Electronic Health Record (EHR) notes that can be useful for biomedical research provided natural language processing (NLP) methods are available to extract and structure this information. In th...

Predicting post-stroke pneumonia using deep neural network approaches.

International journal of medical informatics
BACKGROUND AND PURPOSE: Pneumonia is a common complication after stroke, causing an increased length of hospital stay and death. Therefore, the timely and accurate prediction of post-stroke pneumonia would be highly valuable in clinical practice. Pre...

Validation of an alcohol misuse classifier in hospitalized patients.

Alcohol (Fayetteville, N.Y.)
BACKGROUND: Current modes of identifying alcohol misuse in hospitalized patients rely on self-report questionnaires and diagnostic codes that have limitations, including low sensitivity. Information in the clinical notes of the electronic health reco...