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Functional annotation of human cognitive states using deep graph convolution.

NeuroImage
A key goal in neuroscience is to understand brain mechanisms of cognitive functions. An emerging approach is "brain decoding", which consists of inferring a set of experimental conditions performed by a participant, using pattern classification of br...

Comparative study using inverse ontology cogency and alternatives for concept recognition in the annotated National Library of Medicine database.

Neural networks : the official journal of the International Neural Network Society
This paper introduces inverse ontology cogency, a concept recognition process and distance function that is biologically-inspired and competitive with alternative methods. The paper introduces inverse ontology cogency as a new alternative method. It ...

Reliability modelling of resting-state functional connectivity.

NeuroImage
Resting-state functional magnetic resonance imaging (rs-fMRI) has an inherently low signal-to-noise ratio largely due to thermal and physiological noise that attenuates the functional connectivity (FC) estimates. Such attenuation limits the reliabili...

Whole-brain modelling of resting state fMRI differentiates ADHD subtypes and facilitates stratified neuro-stimulation therapy.

NeuroImage
Recent advances in non-linear computational and dynamical modelling have opened up the possibility to parametrize dynamic neural mechanisms that drive complex behavior. Importantly, building models of neuronal processes is of key importance to fully ...

Deep Learning-based Classification of Resting-state fMRI Independent-component Analysis.

Neuroinformatics
Functional connectivity analyses of fMRI data have shown that the activity of the brain at rest is spatially organized into resting-state networks (RSNs). RSNs appear as groups of anatomically distant but functionally tightly connected brain regions....

Integrated functional neuronal network analysis of 3D silk-collagen scaffold-based mouse cortical culture.

STAR protocols
Bioengineered 3D tunable neuronal constructs are a versatile platform for studying neuronal network functions, offering numerous advantages over existing technologies and providing for the discovery of new biological insights. Functional neural netwo...

The Generation and Modulation of Distinct Gamma Oscillations with Local, Horizontal, and Feedback Connections in the Primary Visual Cortex: A Model Study on Large-Scale Networks.

Neural plasticity
Gamma oscillation (GAMMA) in the local field potential (LFP) is a synchronized activity commonly found in many brain regions, and it has been thought as a functional signature of network connectivity in the brain, which plays important roles in infor...

Neural Interactions in Developing Rhythmogenic Spinal Networks: Insights From Computational Modeling.

Frontiers in neural circuits
The mechanisms involved in generation of rhythmic locomotor activity in the mammalian spinal cord remain poorly understood. These mechanisms supposedly rely on both intrinsic properties of constituting neurons and interactions between them. A subset ...

Strong inhibitory signaling underlies stable temporal dynamics and working memory in spiking neural networks.

Nature neuroscience
Cortical neurons process information on multiple timescales, and areas important for working memory (WM) contain neurons capable of integrating information over a long timescale. However, the underlying mechanisms for the emergence of neuronal timesc...

Structure-function coupling in the human connectome: A machine learning approach.

NeuroImage
While the function of most biological systems is tightly constrained by their structure, current evidence suggests that coupling between the structure and function of brain networks is relatively modest. We aimed to investigate whether the modest cou...