AIMC Topic: Datasets as Topic

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Evaluation of machine learning approaches for cell-type identification from single-cell transcriptomics data.

Briefings in bioinformatics
Single-cell transcriptomics technologies have vast potential in advancing our understanding of cellular heterogeneity in complex tissues. While methods to interpret single-cell transcriptomics data are developing rapidly, challenges in most analysis ...

XGSEA: CROSS-species gene set enrichment analysis via domain adaptation.

Briefings in bioinformatics
MOTIVATION: Gene set enrichment analysis (GSEA) has been widely used to identify gene sets with statistically significant difference between cases and controls against a large gene set. GSEA needs both phenotype labels and expression of genes. Howeve...

DeepCNV: a deep learning approach for authenticating copy number variations.

Briefings in bioinformatics
Copy number variations (CNVs) are an important class of variations contributing to the pathogenesis of many disease phenotypes. Detecting CNVs from genomic data remains difficult, and the most currently applied methods suffer from an unacceptably hig...

Clinician-driven artificial intelligence in ophthalmology: resources enabling democratization.

Current opinion in ophthalmology
PURPOSE OF REVIEW: This article aims to discuss the current state of resources enabling the democratization of artificial intelligence (AI) in ophthalmology.

Transfer learning for mobile real-time face mask detection and localization.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Due to the COVID-19 pandemic, our daily habits have suddenly changed. Gatherings are forbidden and, even when it is possible to leave the home for health or work reasons, it is necessary to wear a face mask to reduce the possibility of con...

Convolutional Neural Network Models for Automatic Preoperative Severity Assessment in Unilateral Cleft Lip.

Plastic and reconstructive surgery
BACKGROUND: Despite the wide range of cleft lip morphology, consistent scales to categorize preoperative severity do not exist. Machine learning has been used to increase accuracy and efficiency in detection and rating of multiple conditions, yet it ...

3D brain glioma segmentation in MRI through integrating multiple densely connected 2D convolutional neural networks.

Journal of Zhejiang University. Science. B
To overcome the computational burden of processing three-dimensional (3D) medical scans and the lack of spatial information in two-dimensional (2D) medical scans, a novel segmentation method was proposed that integrates the segmentation results of th...

Multimodal, multitask, multiattention (M3) deep learning detection of reticular pseudodrusen: Toward automated and accessible classification of age-related macular degeneration.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: Reticular pseudodrusen (RPD), a key feature of age-related macular degeneration (AMD), are poorly detected by human experts on standard color fundus photography (CFP) and typically require advanced imaging modalities such as fundus autoflu...