AIMC Topic: Deep Learning

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Data augmentation using generative adversarial networks (CycleGAN) to improve generalizability in CT segmentation tasks.

Scientific reports
Labeled medical imaging data is scarce and expensive to generate. To achieve generalizable deep learning models large amounts of data are needed. Standard data augmentation is a method to increase generalizability and is routinely performed. Generati...

Application of deep learning in aquatic bioassessment: Towards automated identification of non-biting midges.

The Science of the total environment
Morphological species identification is often a difficult, expensive, and time-consuming process which hinders the ability for reliable biomonitoring of aquatic ecosystems. An alternative approach is to automate the whole process, accelerating the id...

Identification of Synthetic Activators of Cancer Cell Migration by Hybrid Deep Learning.

Chembiochem : a European journal of chemical biology
Deep convolutional neural networks (CNNs) are a method of choice for image recognition. Herein a hybrid CNN approach is presented for molecular pattern recognition in drug discovery. Using self-organizing map images of molecular pharmacophores as inp...

A novel enhanced softmax loss function for brain tumour detection using deep learning.

Journal of neuroscience methods
BACKGROUND AND AIM: In deep learning, the sigmoid function is unsuccessfully used for the multiclass classification of the brain tumour due to its limit of binary classification. This study aims to increase the classification accuracy by reducing the...

The assessment of efficient representation of drug features using deep learning for drug repositioning.

BMC bioinformatics
BACKGROUND: De novo drug discovery is a time-consuming and expensive process. Nowadays, drug repositioning is utilized as a common strategy to discover a new drug indication for existing drugs. This strategy is mostly used in cases with a limited num...

An improved deep learning method for predicting DNA-binding proteins based on contextual features in amino acid sequences.

PloS one
As the number of known proteins has expanded, how to accurately identify DNA binding proteins has become a significant biological challenge. At present, various computational methods have been proposed to recognize DNA-binding proteins from only amin...

Subject-Independent Brain-Computer Interfaces Based on Deep Convolutional Neural Networks.

IEEE transactions on neural networks and learning systems
For a brain-computer interface (BCI) system, a calibration procedure is required for each individual user before he/she can use the BCI. This procedure requires approximately 20-30 min to collect enough data to build a reliable decoder. It is, theref...

Brain pathology identification using computer aided diagnostic tool: A systematic review.

Computer methods and programs in biomedicine
Computer aided diagnostic (CAD) has become a significant tool in expanding patient quality-of-life by reducing human errors in diagnosis. CAD can expedite decision-making on complex clinical data automatically. Since brain diseases can be fatal, rapi...

A multi-context CNN ensemble for small lesion detection.

Artificial intelligence in medicine
In this paper, we propose a novel method for the detection of small lesions in digital medical images. Our approach is based on a multi-context ensemble of convolutional neural networks (CNNs), aiming at learning different levels of image spatial con...