AIMC Topic: Deep Learning

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Deep Learning for Chest Radiograph Diagnosis in the Emergency Department.

Radiology
BackgroundThe performance of a deep learning (DL) algorithm should be validated in actual clinical situations, before its clinical implementation.PurposeTo evaluate the performance of a DL algorithm for identifying chest radiographs with clinically r...

A question-entailment approach to question answering.

BMC bioinformatics
BACKGROUND: One of the challenges in large-scale information retrieval (IR) is developing fine-grained and domain-specific methods to answer natural language questions. Despite the availability of numerous sources and datasets for answer retrieval, Q...

MR Protocol Optimization With Deep Learning: A Proof of Concept.

Current problems in diagnostic radiology
PURPOSE: This study was performed to demonstrate that a properly trained convolutional neural net (CNN) can provide an acceptable surrogate for human readers when performing a protocol optimization study. Tears of the anterior cruciate ligament (ACL)...

FatSegNet: A fully automated deep learning pipeline for adipose tissue segmentation on abdominal dixon MRI.

Magnetic resonance in medicine
PURPOSE: Introduce and validate a novel, fast, and fully automated deep learning pipeline (FatSegNet) to accurately identify, segment, and quantify visceral and subcutaneous adipose tissue (VAT and SAT) within a consistent, anatomically defined abdom...

Deep Learning Based on Standard H&E Images of Primary Melanoma Tumors Identifies Patients at Risk for Visceral Recurrence and Death.

Clinical cancer research : an official journal of the American Association for Cancer Research
PURPOSE: Biomarkers for disease-specific survival (DSS) in early-stage melanoma are needed to select patients for adjuvant immunotherapy and accelerate clinical trial design. We present a pathology-based computational method using a deep neural netwo...

Accurate and robust segmentation of neuroanatomy in T1-weighted MRI by combining spatial priors with deep convolutional neural networks.

Human brain mapping
Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for quantitative volume, thickness, and shape measurements, as well as an important intermediate step in many preprocessing pipelines. This work introduce...

Deep learning in the detection of high-grade glioma recurrence using multiple MRI sequences: A pilot study.

Journal of clinical neuroscience : official journal of the Neurosurgical Society of Australasia
The identification of high-grade glioma (HGG) progression may pose a diagnostic dilemma due to similar appearances of treatment-related changes (TRC) (e.g. pseudoprogression or radionecrosis). Deep learning (DL) may be able to assist with this task. ...

Unified rational protein engineering with sequence-based deep representation learning.

Nature methods
Rational protein engineering requires a holistic understanding of protein function. Here, we apply deep learning to unlabeled amino-acid sequences to distill the fundamental features of a protein into a statistical representation that is semantically...

A Deep Learning-Based Approach for High-Throughput Hypocotyl Phenotyping.

Plant physiology
Hypocotyl length determination is a widely used method to phenotype young seedlings. The measurement itself has advanced from using rulers and millimeter papers to assessing digitized images but remains a labor-intensive, monotonous, and time-consumi...

Expert-level detection of acute intracranial hemorrhage on head computed tomography using deep learning.

Proceedings of the National Academy of Sciences of the United States of America
Computed tomography (CT) of the head is used worldwide to diagnose neurologic emergencies. However, expertise is required to interpret these scans, and even highly trained experts may miss subtle life-threatening findings. For head CT, a unique chall...