AIMC Topic: Oligopeptides
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Engineered Extracellular Matrices with Integrated Wireless Microactuators to Study Mechanobiology.
Advanced materials (Deerfield Beach, Fla.)
Aug 7, 2021
Mechanobiology explores how forces regulate cell behaviors and what molecular machinery are responsible for the sensing, transduction, and modulation of mechanical cues. To this end, probing of cells cultured on planar substrates has served as a prim...
Beyond Tripeptides Two-Step Active Machine Learning for Very Large Data sets.
Journal of chemical theory and computation
Apr 27, 2021
Self-assembling peptide nanostructures have been shown to be of great importance in nature and have presented many promising applications, for example, in medicine as drug-delivery vehicles, biosensors, and antivirals. Being very promising candidates...
QSSR Modeling of Bacillus Subtilis Lipase A Peptide Collision Cross-Sections in Ion Mobility Spectrometry: Local Descriptor Versus Global Descriptor.
The protein journal
Jan 16, 2021
To investigate the structure-dependent peptide mobility behavior in ion mobility spectrometry (IMS), quantitative structure-spectrum relationship (QSSR) is systematically modeled and predicted for the collision cross section Ω values of totally 162 s...
Deep Learning Based Drug Screening for Novel Coronavirus 2019-nCov.
Interdisciplinary sciences, computational life sciences
Jun 1, 2020
A novel coronavirus, called 2019-nCoV, was recently found in Wuhan, Hubei Province of China, and now is spreading across China and other parts of the world. Although there are some drugs to treat 2019-nCoV, there is no proper scientific evidence abou...
Molecular Dynamics Simulation
Drug Evaluation, Preclinical
Amino Acid Sequence
Coronavirus Infections
Deep Learning
User-Computer Interface
Antiviral Agents
Models, Molecular
Databases, Nucleic Acid
Sequence Alignment
Cysteine Endopeptidases
Databases, Pharmaceutical
Ligands
Catalytic Domain
Oligopeptides
Viral Nonstructural Proteins
Humans
Pandemics
COVID-19
SARS-CoV-2
Drug Design
Structural Homology, Protein
Betacoronavirus
Pneumonia, Viral
Coronavirus 3C Proteases
Level of neo-epitope predecessor and mutation type determine T cell activation of MHC binding peptides.
Journal for immunotherapy of cancer
May 22, 2019
BACKGROUND: Targeting epitopes derived from neo-antigens (or "neo-epitopes") represents a promising immunotherapy approach with limited off-target effects. However, most peptides predicted using MHC binding prediction algorithms do not induce a CD8 +...
Extraction, identification and structure-activity relationship of antioxidant peptides from sesame (Sesamum indicum L.) protein hydrolysate.
Food research international (Ottawa, Ont.)
Sep 4, 2018
To elucidate the sequence, origin and structure-activity relationship of antioxidant peptides from sesame protein, sesame protein was hydrolysed by a dual-enzyme system comprised alcalase and trypsin, then this hydrolysate was fractionated by ultrafi...
Structure-function properties of hypolipidemic peptides.
Journal of food biochemistry
Mar 8, 2018
This review addresses the structure-function properties of hypolipidemic peptides. The cholesterol-lowering peptide (lactostatin: IIAEK) operates via a new regulatory pathway in the calcium-channel-related mitogen-activated protein kinase (MAPK) sign...
Ga PSMA-11 PET with CT urography protocol in the initial staging and biochemical relapse of prostate cancer.
Cancer imaging : the official publication of the International Cancer Imaging Society
Dec 21, 2017
BACKGROUND: Ga-labelled prostate specific membrane antigen (PSMA) ligand PET/CT is a promising modality in primary staging (PS) and biochemical relapse (BCR) of prostate cancer (PC). However, pelvic nodes or local recurrences can be difficult to diff...
Integration of CT urography improves diagnostic confidence of Ga-PSMA-11 PET/CT in prostate cancer patients.
Cancer imaging : the official publication of the International Cancer Imaging Society
Dec 20, 2017
BACKGROUND: To prove the feasibility of integrating CT urography (CTU) into Ga-PSMA-11 PET/CT and to analyze the impact of CTU on assigning focal tracer accumulation in the ureteric space to either ureteric excretion or metastatic disease concerning ...
isGPT: An optimized model to identify sub-Golgi protein types using SVM and Random Forest based feature selection.
Artificial intelligence in medicine
Nov 26, 2017
The Golgi Apparatus (GA) is a key organelle for protein synthesis within the eukaryotic cell. The main task of GA is to modify and sort proteins for transport throughout the cell. Proteins permeate through the GA on the ER (Endoplasmic Reticulum) fac...
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