AIMC Topic: Software

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CCPred: Global and population-specific colorectal cancer prediction and metagenomic biomarker identification at different molecular levels using machine learning techniques.

Computers in biology and medicine
Colorectal cancer (CRC) ranks as the third most common cancer globally and the second leading cause of cancer-related deaths. Recent research highlights the pivotal role of the gut microbiota in CRC development and progression. Understanding the comp...

Evaluation of deep learning based dose prediction in head and neck cancer patients using two different types of input contours.

Journal of applied clinical medical physics
PURPOSE: This study evaluates deep learning (DL) based dose prediction methods in head and neck cancer (HNC) patients using two types of input contours.

Concept of flexible no-code automation for complex sample preparation procedures.

Journal of chromatography. A
Driven by demographic changes and dwindling Science Technology Engineering Mathematics enrolments, our research introduces no-code automation as a strategic response, aimed at mitigating labor shortages while enhancing productivity and safety in the ...

simona: a comprehensive R package for semantic similarity analysis on bio-ontologies.

BMC genomics
BACKGROUND: Bio-ontologies are keys in structuring complex biological information for effective data integration and knowledge representation. Semantic similarity analysis on bio-ontologies quantitatively assesses the degree of similarity between bio...

Neuromorphic intermediate representation: A unified instruction set for interoperable brain-inspired computing.

Nature communications
Spiking neural networks and neuromorphic hardware platforms that simulate neuronal dynamics are getting wide attention and are being applied to many relevant problems using Machine Learning. Despite a well-established mathematical foundation for neur...

Automatic generation of diffusion tensor imaging for the lumbar nerve using convolutional neural networks.

Magnetic resonance imaging
【PURPOSE】: Diffusion Tensor Imaging (DTI) with tractography is useful for the functional diagnosis of degenerative lumbar disorders. However, it is not widely used in clinical settings due to time and health care provider costs, as it is performed ma...

Exploring the Impact of GitHub Copilot on Health Informatics Education.

Applied clinical informatics
BACKGROUND:  The use of artificial intelligence-driven code completion tools, particularly the integration of GitHub Copilot with Visual Studio, has potential implications for Health Informatics education, particularly for students learning SQL and P...

SpeechBrain-MOABB: An open-source Python library for benchmarking deep neural networks applied to EEG signals.

Computers in biology and medicine
Deep learning has revolutionized EEG decoding, showcasing its ability to outperform traditional machine learning models. However, unlike other fields, EEG decoding lacks comprehensive open-source libraries dedicated to neural networks. Existing tools...

AI-derived comparative assessment of the performance of pathogenicity prediction tools on missense variants of breast cancer genes.

Human genomics
Single nucleotide variants (SNVs) can exert substantial and extremely variable impacts on various cellular functions, making accurate predictions of their consequences challenging, albeit crucial especially in clinical settings such as in oncology. L...

Application of Machine Learning in a Rodent Malaria Model for Rapid, Accurate, and Consistent Parasite Counts.

The American journal of tropical medicine and hygiene
Rodent malaria models serve as important preclinical antimalarial and vaccine testing tools. Evaluating treatment outcomes in these models often requires manually counting parasite-infected red blood cells (iRBCs), a time-consuming process, which can...