AIMC Topic: Support Vector Machine

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InterPred: A pipeline to identify and model protein-protein interactions.

Proteins Mar 21, 2017
Protein-protein interactions (PPI) are crucial for protein function. There exist many techniques to identify PPIs experimentally, but to determine the interactions in molecular detail is still difficult and very time-consuming. The fact that the numb...
Protein Interaction Domains and Motifs Benchmarking Amino Acid Sequence Protein Interaction Mapping Sequence Analysis, Protein Software Molecular Docking Simulation Computational Biology Support Vector Machine Proteins Internet
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Princeton_TIGRESS 2.0: High refinement consistency and net gains through support vector machines and molecular dynamics in double-blind predictions during the CASP11 experiment.

Proteins Mar 21, 2017
Protein structure refinement is the challenging problem of operating on any protein structure prediction to improve its accuracy with respect to the native structure in a blind fashion. Although many approaches have been developed and tested during t...
Software Computational Biology Support Vector Machine Benchmarking Models, Statistical Proteins Molecular Dynamics Simulation Double-Blind Method Protein Conformation Internet Monte Carlo Method
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Utilization of machine learning for prediction of post-traumatic stress: a re-examination of cortisol in the prediction and pathways to non-remitting PTSD.

Translational psychiatry Mar 21, 2017
To date, studies of biological risk factors have revealed inconsistent relationships with subsequent post-traumatic stress disorder (PTSD). The inconsistent signal may reflect the use of data analytic tools that are ill equipped for modeling the comp...
Adrenocorticotropic Hormone Linear Models Urine Wounds and Injuries Hydrocortisone Saliva Lymphocytes Heart Rate Psychological Trauma Receptors, Glucocorticoid Stress Disorders, Post-Traumatic ROC Curve Support Vector Machine Longitudinal Studies Blood Pressure Area Under Curve Emergency Service, Hospital Norepinephrine Young Adult Adult Humans Male Machine Learning Risk Assessment Algorithms Female
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Vector-model-supported approach in prostate plan optimization.

Medical dosimetry : official journal of the American Association of Medical Dosimetrists Mar 18, 2017
Lengthy time consumed in traditional manual plan optimization can limit the use of step-and-shoot intensity-modulated radiotherapy/volumetric-modulated radiotherapy (S&S IMRT/VMAT). A vector model base, retrieving similar radiotherapy cases, was deve...
Radiometry Male Humans Models, Biological Computer Simulation Decision Support Systems, Clinical Radiotherapy Planning, Computer-Assisted Reproducibility of Results Support Vector Machine Pattern Recognition, Automated Sensitivity and Specificity Prostatic Neoplasms Radiotherapy Dosage
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Vector-model-supported optimization in volumetric-modulated arc stereotactic radiotherapy planning for brain metastasis.

Medical dosimetry : official journal of the American Association of Medical Dosimetrists Mar 18, 2017
Long planning time in volumetric-modulated arc stereotactic radiotherapy (VMA-SRT) cases can limit its clinical efficiency and use. A vector model could retrieve previously successful radiotherapy cases that share various common anatomic features wit...
Cranial Irradiation Sensitivity and Specificity Brain Neoplasms Humans Male Decision Support Systems, Clinical Pattern Recognition, Automated Computer Simulation Middle Aged Support Vector Machine Reproducibility of Results Radiotherapy Dosage Female Models, Biological Aged Radiosurgery Radiotherapy Planning, Computer-Assisted Aged, 80 and over Radiometry Adult
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Prediction of virus-host infectious association by supervised learning methods.

BMC bioinformatics Mar 14, 2017
BACKGROUND: The study of virus-host infectious association is important for understanding the functions and dynamics of microbial communities. Both cellular and fractionated viral metagenomic data generate a large number of viral contigs with missing...
Sequence Analysis, DNA Bayes Theorem Metagenomics Host-Pathogen Interactions Genome, Viral Likelihood Functions Viruses Logistic Models Models, Theoretical Support Vector Machine DNA, Viral Reproducibility of Results ROC Curve Bacteria
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Online Classification of Contaminants Based on Multi-Classification Support Vector Machine Using Conventional Water Quality Sensors.

Sensors (Basel, Switzerland) Mar 13, 2017
Water quality early warning system is mainly used to detect deliberate or accidental water pollution events in water distribution systems. Identifying the types of pollutants is necessary after detecting the presence of pollutants to provide warning ...
Algorithms Support Vector Machine Water Quality
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Decision Support System for Detection of Papilledema through Fundus Retinal Images.

Journal of medical systems Mar 10, 2017
A condition in which the optic nerve inside the eye is swelled due to increased intracranial pressure is known as papilledema. The abnormalities due to papilledema such as opacification of Retinal Nerve Fiber Layer (RNFL), dilated optic disc capillar...
Humans Support Vector Machine Fundus Oculi Image Interpretation, Computer-Assisted Pakistan Papilledema
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Screening of autism based on task-free fMRI using graph theoretical approach.

Psychiatry research. Neuroimaging Mar 9, 2017
Studies on autism spectrum disorder (ASD) have indicated several dysfunctions in the structure, and functional organization of the brain. However, findings have not been established as a general diagnostic tool yet. In this regard, current study prop...
Brain Male Magnetic Resonance Imaging Humans Adolescent Brain Mapping Reproducibility of Results Autism Spectrum Disorder Child Autistic Disorder Young Adult Support Vector Machine Nerve Net Adult
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predCar-site: Carbonylation sites prediction in proteins using support vector machine with resolving data imbalanced issue.

Analytical biochemistry Mar 9, 2017
The carbonylation is found as an irreversible post-translational modification and considered a biomarker of oxidative stress. It plays major role not only in orchestrating various biological processes but also associated with some diseases such as Al...
Algorithms Computational Biology Support Vector Machine Protein Processing, Post-Translational Humans Software Proteins Models, Biological Protein Carbonylation Sequence Analysis, Protein
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