AIMC Topic: Datasets as Topic

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An open, multi-vendor, multi-field-strength brain MR dataset and analysis of publicly available skull stripping methods agreement.

NeuroImage Aug 12, 2017
This paper presents an open, multi-vendor, multi-field strength magnetic resonance (MR) T1-weighted volumetric brain imaging dataset, named Calgary-Campinas-359 (CC-359). The dataset is composed of images of older healthy adults (29-80 years) acquire...
Humans Machine Learning Software Magnetic Fields Skull Middle Aged Consensus Image Processing, Computer-Assisted Magnetic Resonance Imaging Datasets as Topic Neuroimaging Aged, 80 and over Brain Adult Female Male Aged
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EMQIT: a machine learning approach for energy based PWM matrix quality improvement.

Biology direct Aug 1, 2017
BACKGROUND: Transcription factor binding affinities to DNA play a key role for the gene regulation. Learning the specificity of the mechanisms of binding TFs to DNA is important both to experimentalists and theoreticians. With the development of high...
Software ROC Curve Computational Biology Machine Learning Models, Genetic Transcription Factors Models, Molecular Binding Sites Position-Specific Scoring Matrices Datasets as Topic Gene Expression Regulation
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Improving the Quality of Positive Datasets for the Establishment of Machine Learning Models for pre-microRNA Detection.

Journal of integrative bioinformatics Jul 28, 2017
MicroRNAs (miRNAs) are involved in the post-transcriptional regulation of protein abundance and thus have a great impact on the resulting phenotype. It is, therefore, no wonder that they have been implicated in many diseases ranging from virus infect...
Humans Machine Learning MicroRNAs Registries Datasets as Topic
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Defining and characterizing the critical transition state prior to the type 2 diabetes disease.

PloS one Jul 7, 2017
BACKGROUND: Type 2 diabetes mellitus (T2DM), with increased risk of serious long-term complications, currently represents 8.3% of the adult population. We hypothesized that a critical transition state prior to the new onset T2DM can be revealed throu...
Adult Diabetes Mellitus, Type 2 Prediabetic State Markov Chains Humans Male Maine Insulin Resistance Datasets as Topic Electronic Health Records Support Vector Machine Gene Expression Profiling Health Information Exchange Gene Expression Regulation Female
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Estimating psychopathological networks: Be careful what you wish for.

PloS one Jun 23, 2017
Network models, in which psychopathological disorders are conceptualized as a complex interplay of psychological and biological components, have become increasingly popular in the recent psychopathological literature (Borsboom, et. al., 2011). These ...
Humans Psychopathology Neural Networks, Computer Logistic Models Research Design Datasets as Topic Multivariate Analysis
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1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life.

Nature biotechnology Jun 12, 2017
We present 1,003 reference genomes that were sequenced as part of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) initiative, selected to maximize sequence coverage of phylogenetic space. These genomes double the number of existing type strai...
Chromosome Mapping Encyclopedias as Topic Genome, Archaeal Datasets as Topic Genome, Bacterial Knowledge Bases Database Management Systems Reference Values High-Throughput Nucleotide Sequencing Databases, Genetic
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Omics Data Complementarity Underlines Functional Cross-Communication in Yeast.

Journal of integrative bioinformatics Jun 10, 2017
Mapping the complete functional layout of a cell and understanding the cross-talk between different processes are fundamental challenges. They elude us because of the incompleteness and noisiness of molecular data and because of the computational int...
Gene Ontology Computational Biology Datasets as Topic Saccharomyces cerevisiae Gene Expression Profiling Protein Interaction Maps Gene Regulatory Networks
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DeepNano: Deep recurrent neural networks for base calling in MinION nanopore reads.

PloS one Jun 5, 2017
The MinION device by Oxford Nanopore produces very long reads (reads over 100 kBp were reported); however it suffers from high sequencing error rate. We present an open-source DNA base caller based on deep recurrent neural networks and show that the ...
High-Throughput Nucleotide Sequencing Neural Networks, Computer Datasets as Topic Klebsiella pneumoniae Software Nanopores Escherichia coli Sequence Analysis, DNA
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Recommender system based on scarce information mining.

Neural networks : the official journal of the International Neural Network Society May 31, 2017
Guessing what user may like is now a typical interface for video recommendation. Nowadays, the highly popular user generated content sites provide various sources of information such as tags for recommendation tasks. Motivated by a real world online ...
Neural Networks, Computer Datasets as Topic Cluster Analysis Internet
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An efficient semi-supervised community detection framework in social networks.

PloS one May 23, 2017
Community detection is an important tasks across a number of research fields including social science, biology, and physics. In the real world, topology information alone is often inadequate to accurately find out community structure due to its spars...
Books Humans Martial Arts Machine Learning United States Dolphins Animals Economics Internet Football Social Behavior Politics Datasets as Topic United Kingdom
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