AIMC Topic: Machine Learning

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Adverse Drug Reaction Predictions Using Stacking Deep Heterogeneous Information Network Embedding Approach.

Molecules (Basel, Switzerland)
Inferring potential adverse drug reactions is an important and challenging task for the drug discovery and healthcare industry. Many previous studies in computational pharmacology have proposed utilizing multi-source drug information to predict drug ...

Imbalanced biomedical data classification using self-adaptive multilayer ELM combined with dynamic GAN.

Biomedical engineering online
BACKGROUND: Imbalanced data classification is an inevitable problem in medical intelligent diagnosis. Most of real-world biomedical datasets are usually along with limited samples and high-dimensional feature. This seriously affects the classificatio...

Combination of conditional random field with a rule based method in the extraction of PICO elements.

BMC medical informatics and decision making
BACKGROUND: Extracting primary care information in terms of Patient/Problem, Intervention, Comparison and Outcome, known as PICO elements, is difficult as the volume of medical information expands and the health semantics is complex to capture it fro...

Biomarkers of erosive arthritis in systemic lupus erythematosus: Application of machine learning models.

PloS one
OBJECTIVE: Limited evidences are available on biomarkers to recognize Systemic Lupus erythematosus (SLE) patients at risk to develop erosive arthritis. Anti-citrullinated peptide antibodies (ACPA) have been widely investigated and identified in up to...

iSEE: Interface structure, evolution, and energy-based machine learning predictor of binding affinity changes upon mutations.

Proteins
Quantitative evaluation of binding affinity changes upon mutations is crucial for protein engineering and drug design. Machine learning-based methods are gaining increasing momentum in this field. Due to the limited number of experimental data, using...

A Primer on Data Analytics in Functional Genomics: How to Move from Data to Insight?

Trends in biochemical sciences
High-throughput methodologies and machine learning have been central in developing systems-level perspectives in molecular biology. Unfortunately, performing such integrative analyses has traditionally been reserved for bioinformaticians. This is now...

Neuroevolution as a tool for microarray gene expression pattern identification in cancer research.

Journal of biomedical informatics
Microarrays are still one of the major techniques employed to study cancer biology. However, the identification of expression patterns from microarray datasets is still a significant challenge to overcome. In this work, a new approach using Neuroevol...

Learning Spatial-Spectral-Temporal EEG Features With Recurrent 3D Convolutional Neural Networks for Cross-Task Mental Workload Assessment.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
Mental workload assessment is essential for maintaining human health and preventing accidents. Most research on this issue is limited to a single task. However, cross-task assessment is indispensable for extending a pre-trained model to new workload ...

High-throughput brain activity mapping and machine learning as a foundation for systems neuropharmacology.

Nature communications
Technologies for mapping the spatial and temporal patterns of neural activity have advanced our understanding of brain function in both health and disease. An important application of these technologies is the discovery of next-generation neurotherap...

Machine-learned models using hematological inflammation markers in the prediction of short-term acute coronary syndrome outcomes.

Journal of translational medicine
BACKGROUND: Increased systemic and local inflammation play a vital role in the pathophysiology of acute coronary syndrome. This study aimed to assess the usefulness of selected machine learning methods and hematological markers of inflammation in pre...