AIMC Topic: Proteomics

Clear Filters Showing 1 to 10 of 537 articles

Integrative multi-omics and network-based machine learning for early diagnosis of Parkinson's disease.

PloS one
BACKGROUND: Accurate diagnosis of Parkinson's Disease (PD) remains challenging due to its biological complexity. Integrating machine learning with multi-omics and network topological analyses may enhance diagnostic precision.

DeepMLP: A Proteomics-Driven Deep Learning Framework for Identifying Mis-Localized Proteins across Pan-Cancer.

Journal of chemical information and modeling
Accurate protein subcellular localization (PSL) is essential for proteins to perform their biological functions, whereas protein mis-localization can disrupt cellular processes and contribute to various diseases, particularly cancer. Although spatial...

Mass Spectrometry Proteomics: A Key to Faster Drug Discovery.

Journal of medicinal chemistry
Mass spectrometry (MS)-based proteomics is a disruptive platform in drug discovery that offers an exhaustive view of the proteome's complexity. Focusing on bottom-up MS proteomics, this technology enables high-throughput analysis of protein expressio...

Large Data Set Analysis Reveals Structural Origin of Peptide Collisional Cross Section Bimodal Behavior.

Journal of the American Society for Mass Spectrometry
Recent advances in ion mobility spectrometry have enabled the measurement of rotationally averaged collisional cross-sectional area (CCS) for millions of peptides as part of routine proteomic mass spectrometry workflows. One of the most striking find...

Omics approaches to understand cardiovascular disease.

BMC cardiovascular disorders
Omics approaches have emerged as indispensable tools in unravelling the intricate molecular landscape of cardiovascular disease (CVD) by providing comprehensive insights into the underlying mechanisms driving CVD pathogenesis, progression, and respon...

Systems pharmacology approaches decipher the anti-cancer efficacy of ethnopharmacological agents in hepatocellular carcinoma.

Scientific reports
Hepatocellular carcinoma (HCC) poses a significant global health burden with limited therapeutic efficacy. Chinese herbal medicines (CHMs) offer multi-target potential, yet their systematic screening and mechanistic elucidation remain challenging. We...

Machine Learning-Driven Extracellular Vesicles Peptidomics Powers Precision Classification of Endometrial Cancer.

Analytical chemistry
Endometrial cancer (EC) molecular subtyping is critical for prognosis and treatment but remains hindered by reliance on invasive tissue biopsies and time-consuming genomic sequencing. Here, we present a minimally invasive approach integrating MALDI-T...

Proteomics-Driven Cancer Biomarkers for Early Detection and Targeted Therapy: Insights from the Middle East.

Journal of proteome research
Proteomics has become a transformative tool in oncology, offering unique opportunities for early detection, diagnosis, and cancer stratification. By enabling large-scale analysis of protein expression, interactions, and post-translational modificatio...

Spatial omics: applications and utility in profiling the tumor microenvironment.

Cancer metastasis reviews
Spatial transcriptomics has emerged as a transformative technology in biomedical research, offering unprecedented insights into gene and protein expression within their native tissue context. Unlike conventional bulk or single-cell sequencing approac...

The Omics Molecule Extractor: A Web Application for the Selection of Potential Biomarker Panels.

Journal of proteome research
Selecting molecular panels that are applicable to classify the health state of patients is a common task in omics data analysis. Existing software for molecule selection lacks features to select molecule panels from large data sets, requires programm...