BACKGROUND: Manually curating standardized phenotypic concepts such as Human Phenotype Ontology (HPO) terms from narrative text in electronic health records (EHRs) is time consuming and error prone. Natural language processing (NLP) techniques can fa...
BACKGROUND: Substance use disorder (SUD) exacts enormous societal costs in the United States, and it is important to detect high-risk youths for prevention. Machine learning (ML) is the method to find patterns and make prediction from data. We hypoth...
BACKGROUND: Microbes are greatly associated with human health and disease, especially in densely populated cities. It is essential to understand the microbial ecosystem in an urban environment for cities to monitor the transmission of infectious dise...
PURPOSE: Introduce and validate a novel, fast, and fully automated deep learning pipeline (FatSegNet) to accurately identify, segment, and quantify visceral and subcutaneous adipose tissue (VAT and SAT) within a consistent, anatomically defined abdom...
Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for quantitative volume, thickness, and shape measurements, as well as an important intermediate step in many preprocessing pipelines. This work introduce...
Computational and mathematical methods in medicine
Oct 20, 2019
Motion artifacts and myoelectrical noise are common issues complicating the collection and processing of dynamic electrocardiogram (ECG) signals. Recent signal quality studies have utilized a binary classification metric in which ECG samples are dete...
Scandinavian cardiovascular journal : SCJ
Oct 18, 2019
In heart failure, invasive angiography is often employed to differentiate ischaemic from non-ischaemic cardiomyopathy. We aim to examine the predictive value of echocardiographic strain features alone and in combination with other features to differ...
Computer methods and programs in biomedicine
Oct 17, 2019
BACKGROUND AND OBJECTIVES: Intrauterine Growth Restriction (IUGR) is a fetal condition defined as the abnormal rate of fetal growth. The pathology is a documented cause of fetal and neonatal morbidity and mortality. In clinical practice, diagnosis is...
Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association
Oct 16, 2019
OBJECT: Ischemic stroke readmission within 90 days of hospital discharge is an important quality of care metric. The readmission rates of ischemic stroke patients are usually higher than those of patients with other chronic diseases. Our aim was to i...
BACKGROUND: Restricted Boltzmann machines (RBMs), including greedy layer-wise trained RBMs as part of a deep belief network (DBN), have the ability to identify spatial patterns (SPs; functional networks) in resting-state fMRI (rfMRI) data. However, t...
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