AIMC Topic: Animals

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Machine learning reveals the dynamic importance of accessory sequences for outbreak clustering.

mBio
UNLABELLED: Bacterial typing at whole-genome scales is now feasible owing to decreasing costs in high-throughput sequencing and the recent advances in computation. The unprecedented resolution of whole-genome typing is achieved by genotyping the vari...

Machine-Learning-Based Activity Tracking for Individual Pig Monitoring in Experimental Facilities for Improved Animal Welfare in Research.

Sensors (Basel, Switzerland)
In experimental research, animal welfare should always be of the highest priority. Currently, physical in-person observations are the standard. This is time-consuming, and results are subjective. Video-based machine learning models for monitoring exp...

Marigold: a machine learning-based web app for zebrafish pose tracking.

BMC bioinformatics
BACKGROUND: High-throughput behavioral analysis is important for drug discovery, toxicological studies, and the modeling of neurological disorders such as autism and epilepsy. Zebrafish embryos and larvae are ideal for such applications because they ...

Recurrent neural networks with transient trajectory explain working memory encoding mechanisms.

Communications biology
Whether working memory (WM) is encoded by persistent activity using attractors or by dynamic activity using transient trajectories has been debated for decades in both experimental and modeling studies, and a consensus has not been reached. Even thou...

Development of a one-step multiplex RT-qPCR method for rapid detection of bovine diarrhea viruses.

Frontiers in cellular and infection microbiology
INTRODUCTION: Viral calf diarrhea poses a significant challenge to the cattle industry worldwide due to its high morbidity and mortality rates, leading to substantial economic losses. The clinical symptoms associated with various diarrhea pathogens o...

Monitoring of veterinary drug residues in mutton based on hyperspectral combined with explainable AI: A case study of OFX.

Food chemistry
Veterinary drug residues in meat seriously harm human health. Rapid and accurate detection of veterinary drug residues is necessary to minimize contamination. Taking ofloxacin (OFX) residues in mutton as an example, the near-infrared hyperspectral im...

Prediction of Pharmacoresistance in Drug-Naïve Temporal Lobe Epilepsy Using Ictal EEGs Based on Convolutional Neural Network.

Neuroscience bulletin
Approximately 30%-40% of epilepsy patients do not respond well to adequate anti-seizure medications (ASMs), a condition known as pharmacoresistant epilepsy. The management of pharmacoresistant epilepsy remains an intractable issue in the clinic. Its ...

Novel automation, artificial intelligence, and biomimetic engineering advancements for insect studies and management.

Current opinion in insect science
Entomology has seen remarkable advancements through the integration of robotics, artificial intelligence (AI), and biomimetic engineering. These technological innovations are revolutionizing how scientists study insect behavior, ecology, and manageme...

Development and applications of a machine learning model for an in-depth analysis of pentylenetetrazol-induced seizure-like behaviors in adult zebrafish.

Neuroscience
Epilepsy, a neurological disorder causing recurring seizures, is often studied in zebrafish by exposing animals to pentylenetetrazol (PTZ), which induces clonic- and tonic-like behaviors. While adult zebrafish seizure-like behaviors are well characte...

A deep learning pipeline for three-dimensional brain-wide mapping of local neuronal ensembles in teravoxel light-sheet microscopy.

Nature methods
Teravoxel-scale, cellular-resolution images of cleared rodent brains acquired with light-sheet fluorescence microscopy have transformed the way we study the brain. Realizing the potential of this technology requires computational pipelines that gener...