AIMC Topic: Algorithms

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A hybrid model based on neural networks for biomedical relation extraction.

Journal of biomedical informatics
Biomedical relation extraction can automatically extract high-quality biomedical relations from biomedical texts, which is a vital step for the mining of biomedical knowledge hidden in the literature. Recurrent neural networks (RNNs) and convolutiona...

A hidden Markov tree model for testing multiple hypotheses corresponding to Gene Ontology gene sets.

BMC bioinformatics
BACKGROUND: Testing predefined gene categories has become a common practice for scientists analyzing high throughput transcriptome data. A systematic way of testing gene categories leads to testing hundreds of null hypotheses that correspond to nodes...

Automatic food detection in egocentric images using artificial intelligence technology.

Public health nutrition
OBJECTIVE: To develop an artificial intelligence (AI)-based algorithm which can automatically detect food items from images acquired by an egocentric wearable camera for dietary assessment.

High-Order Convolutional Neural Network Architecture for Predicting DNA-Protein Binding Sites.

IEEE/ACM transactions on computational biology and bioinformatics
Although Deep learning algorithms have outperformed conventional methods in predicting the sequence specificities of DNA-protein binding, they lack to consider the dependencies among nucleotides and the diverse binding lengths for different transcrip...

Super-resolution musculoskeletal MRI using deep learning.

Magnetic resonance in medicine
PURPOSE: To develop a super-resolution technique using convolutional neural networks for generating thin-slice knee MR images from thicker input slices, and compare this method with alternative through-plane interpolation methods.

Data Analysis Strategies in Medical Imaging.

Clinical cancer research : an official journal of the American Association for Cancer Research
Radiographic imaging continues to be one of the most effective and clinically useful tools within oncology. Sophistication of artificial intelligence has allowed for detailed quantification of radiographic characteristics of tissues using predefined ...

Automated detection and classification of the proximal humerus fracture by using deep learning algorithm.

Acta orthopaedica
Background and purpose - We aimed to evaluate the ability of artificial intelligence (a deep learning algorithm) to detect and classify proximal humerus fractures using plain anteroposterior shoulder radiographs. Patients and methods - 1,891 images (...

Deep learning in mammography and breast histology, an overview and future trends.

Medical image analysis
Recent improvements in biomedical image analysis using deep learning based neural networks could be exploited to enhance the performance of Computer Aided Diagnosis (CAD) systems. Considering the importance of breast cancer worldwide and the promisin...

Fully automated searching for the optimal VMAT jaw settings based on Eclipse Scripting Application Programming Interface (ESAPI) and RapidPlan knowledge-based planning.

Journal of applied clinical medical physics
PURPOSE: Eclipse treatment planning system has not been able to optimize the jaw positions for Volumetric Modulated Arc Therapy (VMAT). The arbitrary and planner-dependent jaw placements define the maximum field size within which multi-leaf-collimato...

Machine learning RF shimming: Prediction by iteratively projected ridge regression.

Magnetic resonance in medicine
PURPOSE: To obviate online slice-by-slice RF shim optimization and reduce B1+ mapping requirements for patient-specific RF shimming in high-field magnetic resonance imaging.