Computational intelligence and neuroscience
Aug 30, 2021
With the development of society and the promotion of science and technology, English, as the largest universal language in the world, is used by more and more people. In the life around us, there is information in English all the time. However, becau...
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Aug 27, 2021
Convolutional Neural Networks (CNNs) can perform similarly or better than standard genomic prediction methods when sufficient genetic, environmental, and management data are provided. Predicting phenotypes from genetic (G), environmental (E), and man...
BACKGROUND: Machine learning tools that semi-automate data extraction may create efficiencies in systematic review production. We evaluated a machine learning and text mining tool's ability to (a) automatically extract data elements from randomized t...
IEEE/ACM transactions on computational biology and bioinformatics
Aug 6, 2021
Topological data analysis (TDA) is a powerful method for reducing data dimensionality, mining underlying data relationships, and intuitively representing the data structure. The Mapper algorithm is one such tool that projects high-dimensional data to...
IEEE journal of biomedical and health informatics
Aug 5, 2021
In this paper, we propose a novel method named Biomedical Confident Itemsets Explanation (BioCIE), aiming at post-hoc explanation of black-box machine learning models for biomedical text classification. Using sources of domain knowledge and a confide...
BACKGROUND: Effective response to public health emergencies, such as we are now experiencing with COVID-19, requires data sharing across multiple disciplines and data systems. Ontologies offer a powerful data sharing tool, and this holds especially f...
In this paper, a novel approach is proposed for the analysis of time-course gene expression data based on the path-breaking work of Zadeh, Computing with Words. This method can automatically discover the patterns of temporal gene expression profile i...
METHODS: We used EHR data of patients included in the Second Manifestations of ARTerial disease (SMART) study. We propose a deep learning-based multimodal architecture for our text mining pipeline that integrates neural text representation with prepr...
Radiomics is a process that allows the extraction and analysis of quantitative data from medical images. It is an evolving field of research with many potential applications in medical imaging. The purpose of this review is to offer a deep look into ...
OBJECTIVE: Investigation of asymptomatic carotid stenosis treatment is hindered by the lack of a contemporary population-based disease cohort. We describe the use of natural language processing (NLP) to identify stenosis in patients undergoing caroti...
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