AIMC Topic: Gene Expression Profiling

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Identification and Validation of Phagocytosis-Regulating Factors as Potential Prognostic and Diagnostic Biomarkers for Intracerebral Hemorrhage Through Single-Cell and Bulk Transcriptomic.

FASEB journal : official publication of the Federation of American Societies for Experimental Biology
Intracerebral hemorrhage (ICH) is a major cause of death and disability worldwide. Despite treatment advances, reliable prognostic biomarkers are still lacking. While phagocytosis regulation is implicated in ICH pathogenesis, its potential for diagno...

Path2Omics Enhances Transcriptomic and Methylation Prediction Accuracy from Tumor Histopathology.

Cancer research
UNLABELLED: Precision oncology is becoming increasingly integral to clinical practice, demonstrating notable improvements in treatment outcomes. Whereas molecular data provide comprehensive insights, obtaining such data remains costly and time-consum...

Discovery of novel diagnostic biomarkers of hepatocellular carcinoma associated with immune infiltration.

Annals of medicine
OBJECTIVE: Diagnosis of hepatocellular carcinoma (HCC) remains challenging for clinicians. Machine learning approaches and big data analyses are viable strategies for identifying HCC diagnostic markers.

Alzheimer's diagnosis by an efficient pipelined gene selection model based on statistical and biological data analysis.

Computational biology and chemistry
Diagnosing Alzheimer's disease based on gene expression data extracted from microarrays is still an open field of research. Due to the availability of whole-genome data through microarrays technology, diagnosis accuracy is expected to be improved. De...

Unveiling the role of oxidative stress in ANCA-associated glomerulonephritis through integrated machine learning and bioinformatics analyses.

Renal failure
Anti-neutrophil cytoplasmic antibody (ANCA)-associated vasculitis (AAV) is a systemic autoimmune disease often leading to rapidly progressive glomerulonephritis. Oxidative stress plays a critical role in the development and progression of ANCA-associ...

Identification and validation of susceptibility modules and hub genes in polyarticular juvenile idiopathic arthritis using WGCNA and machine learning.

Autoimmunity
BACKGROUND: Juvenile idiopathic arthritis (JIA), superseding juvenile rheumatoid arthritis (JRA), is a chronic autoimmune disease affecting children and characterized by various types of childhood arthritis. JIA manifests clinically with joint inflam...

Identification of immune-relevant candidate genes in atherosclerosis by WGCNA and single-cell analysis.

Medicine
Atherosclerosis (AS) is a systemic disease closely related to inflammatory cell infiltration and immune cell activation, often leading to myocardial infarction and stroke and is the leading cause of death worldwide. AS is asymptomatic in its early st...

Machine learning reveal shared diagnostic biomarkers and convergent pathways in age-related hearing loss and sarcopenia.

Medicine
Age-related hearing loss (HL) and sarcopenia (ARS) are prevalent geriatric syndromes sharing common risk factors. This study aimed to identify shared biomarkers and elucidate convergent pathogenic mechanisms. Transcriptomic datasets were obtained fro...

Identification of key genes in cuproptosis during acute kidney injury through weighted gene co-expression network analysis.

Medicine
Acute kidney injury (AKI) is a serious condition characterized by a rapid decline in renal function, leading to severe complications. Recent findings suggest that cuproptosis-related genes (CuRGs) influence AKI mechanisms. This study investigated CuR...