AIMC Topic: Animals

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Advancing Computational Toxicology in the Big Data Era by Artificial Intelligence: Data-Driven and Mechanism-Driven Modeling for Chemical Toxicity.

Chemical research in toxicology
In 2016, the Frank R. Lautenberg Chemical Safety for the 21st Century Act became the first US legislation to advance chemical safety evaluations by utilizing novel testing approaches that reduce the testing of vertebrate animals. Central to this miss...

Large-scale network analysis reveals the sequence space architecture of antibody repertoires.

Nature communications
The architecture of mouse and human antibody repertoires is defined by the sequence similarity networks of the clones that compose them. The major principles that define the architecture of antibody repertoires have remained largely unknown. Here, we...

TADKB: Family classification and a knowledge base of topologically associating domains.

BMC genomics
BACKGROUND: Topologically associating domains (TADs) are considered the structural and functional units of the genome. However, there is a lack of an integrated resource for TADs in the literature where researchers can obtain family classifications a...

Review of Medical Decision Support and Machine-Learning Methods.

Veterinary pathology
Machine-learning methods can assist with the medical decision-making processes at the both the clinical and diagnostic levels. In this article, we first review historical milestones and specific applications of computer-based medical decision support...

Machine learning applied to transcriptomic data to identify genes associated with feed efficiency in pigs.

Genetics, selection, evolution : GSE
BACKGROUND: To date, the molecular mechanisms that underlie residual feed intake (RFI) in pigs are unknown. Results from different genome-wide association studies and gene expression analyses are not always consistent. The aim of this research was to...

Design and demonstration of a bio-inspired flapping-wing-assisted jumping robot.

Bioinspiration & biomimetics
Jumping insects such as fleas, froghoppers, grasshoppers, and locusts take off from the ground using a catapult mechanism to push their legs against the surface of the ground while using their pairs of flapping wings to propel them into the air. Such...

Deep convolutional neural networks for segmenting 3D in vivo multiphoton images of vasculature in Alzheimer disease mouse models.

PloS one
The health and function of tissue rely on its vasculature network to provide reliable blood perfusion. Volumetric imaging approaches, such as multiphoton microscopy, are able to generate detailed 3D images of blood vessels that could contribute to ou...

Quantitative evaluation of ontology design patterns for combining pathology and anatomy ontologies.

Scientific reports
Data are increasingly annotated with multiple ontologies to capture rich information about the features of the subject under investigation. Analysis may be performed over each ontology separately, but recently there has been a move to combine multipl...