AI Medical Compendium Topic

Explore the latest research on artificial intelligence and machine learning in medicine.

DNA Methylation

Showing 121 to 130 of 213 articles

Clear Filters

Integrating multi-omics data by learning modality invariant representations for improved prediction of overall survival of cancer.

Methods (San Diego, Calif.)
Breast and ovarian cancers are the second and the fifth leading causes of cancer death among women. Predicting the overall survival of breast and ovarian cancer patients can facilitate the therapeutics evaluation and treatment decision making. Multi-...

Classifying Breast Cancer Subtypes Using Deep Neural Networks Based on Multi-Omics Data.

Genes
With the high prevalence of breast cancer, it is urgent to find out the intrinsic difference between various subtypes, so as to infer the underlying mechanisms. Given the available multi-omics data, their proper integration can improve the accuracy o...

Evaluation of marker selection methods and statistical models for chronological age prediction based on DNA methylation.

Legal medicine (Tokyo, Japan)
In forensic investigation, retrieving biological information from DNA evidence is a promising field of interest. One of the applications is on the estimation of the age of the donor based on DNA methylation. A large number of studies focused on age p...

Predicting cancer origins with a DNA methylation-based deep neural network model.

PloS one
Cancer origin determination combined with site-specific treatment of metastatic cancer patients is critical to improve patient outcomes. Existing pathology and gene expression-based techniques often have limited performance. In this study, we develop...

Machine learning and clinical epigenetics: a review of challenges for diagnosis and classification.

Clinical epigenetics
BACKGROUND: Machine learning is a sub-field of artificial intelligence, which utilises large data sets to make predictions for future events. Although most algorithms used in machine learning were developed as far back as the 1950s, the advent of big...

Estimating gene expression from DNA methylation and copy number variation: A deep learning regression model for multi-omics integration.

Genomics
Gene expression analysis plays a significant role for providing molecular insights in cancer. Various genetic and epigenetic factors (being dealt under multi-omics) affect gene expression giving rise to cancer phenotypes. A recent growth in understan...

MethylNet: an automated and modular deep learning approach for DNA methylation analysis.

BMC bioinformatics
BACKGROUND: DNA methylation (DNAm) is an epigenetic regulator of gene expression programs that can be altered by environmental exposures, aging, and in pathogenesis. Traditional analyses that associate DNAm alterations with phenotypes suffer from mul...

Collective effects of long-range DNA methylations predict gene expressions and estimate phenotypes in cancer.

Scientific reports
DNA methylation of various genomic regions has been found to be associated with gene expression in diverse biological contexts. However, most genome-wide studies have focused on the effect of (1) methylation in cis, not in trans and (2) a single CpG,...