AIMC Topic: Mice

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Nano-topography Enhances Communication in Neural Cells Networks.

Scientific reports
Neural cells are the smallest building blocks of the central and peripheral nervous systems. Information in neural networks and cell-substrate interactions have been heretofore studied separately. Understanding whether surface nano-topography can dir...

A Machine Learning Approach to Automated Gait Analysis for the Noldus Catwalk System.

IEEE transactions on bio-medical engineering
OBJECTIVE: Gait analysis of animal disease models can provide valuable insights into in vivo compound effects and thus help in preclinical drug development. The purpose of this paper is to establish a computational gait analysis approach for the Nold...

Phase contrast cell detection using multilevel classification.

International journal for numerical methods in biomedical engineering
In this paper, we propose a fully automated learning-based approach for detecting cells in time-lapse phase contrast images. The proposed system combines 2 machine learning approaches to achieve bottom-up image segmentation. We apply pixel-wise class...

Identification of non-activated lymphocytes using three-dimensional refractive index tomography and machine learning.

Scientific reports
Identification of lymphocyte cell types are crucial for understanding their pathophysiological roles in human diseases. Current methods for discriminating lymphocyte cell types primarily rely on labelling techniques with magnetic beads or fluorescenc...

Gaussian process classification of superparamagnetic relaxometry data: Phantom study.

Artificial intelligence in medicine
MOTIVATION: Superparamagnetic relaxometry (SPMR) is an emerging technology that holds potential for use in early cancer detection. Measurement of the magnetic field after the excitation of cancer-bound superparamagnetic iron oxide nanoparticles (SPIO...

Clustering and Candidate Motif Detection in Exosomal miRNAs by Application of Machine Learning Algorithms.

Interdisciplinary sciences, computational life sciences
BACKGROUND: The clustering pattern and motifs give immense information about any biological data. An application of machine learning algorithms for clustering and candidate motif detection in miRNAs derived from exosomes is depicted in this paper. Re...

NoGOA: predicting noisy GO annotations using evidences and sparse representation.

BMC bioinformatics
BACKGROUND: Gene Ontology (GO) is a community effort to represent functional features of gene products. GO annotations (GOA) provide functional associations between GO terms and gene products. Due to resources limitation, only a small portion of anno...

Automated gesture tracking in head-fixed mice.

Journal of neuroscience methods
BACKGROUND: The preparation consisting of a head-fixed mouse on a spherical or cylindrical treadmill offers unique advantages in a variety of experimental contexts. Head fixation provides the mechanical stability necessary for optical and electrophys...

ADMET Evaluation in Drug Discovery. Part 17: Development of Quantitative and Qualitative Prediction Models for Chemical-Induced Respiratory Toxicity.

Molecular pharmaceutics
As a dangerous end point, respiratory toxicity can cause serious adverse health effects and even death. Meanwhile, it is a common and traditional issue in occupational and environmental protection. Pharmaceutical and chemical industries have a strong...

A robot for high yield electrophysiology and morphology of single neurons in vivo.

Nature communications
Single-cell characterization and perturbation of neurons provides knowledge critical to addressing fundamental neuroscience questions including the structure-function relationship and neuronal cell-type classification. Here we report a robot for effi...