AIMC Topic: Models, Biological

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From "ear" to there: a review of biorobotic models of auditory processing in lizards.

Biological cybernetics
The peripheral auditory system of lizards has been extensively studied, because of its remarkable directionality. In this paper, we review the research that has been performed on this system using a biorobotic approach. The various robotic implementa...

Boolean regulatory network reconstruction using literature based knowledge with a genetic algorithm optimization method.

BMC bioinformatics
BACKGROUND: Prior knowledge networks (PKNs) provide a framework for the development of computational biological models, including Boolean models of regulatory networks which are the focus of this work. PKNs are created by a painstaking process of lit...

The BEL information extraction workflow (BELIEF): evaluation in the BioCreative V BEL and IAT track.

Database : the journal of biological databases and curation
Network-based approaches have become extremely important in systems biology to achieve a better understanding of biological mechanisms. For network representation, the Biological Expression Language (BEL) is well designed to collate findings from the...

Bioinspired decision architectures containing host and microbiome processing units.

Bioinspiration & biomimetics
Biomimetic robots have been used to explore and explain natural phenomena ranging from the coordination of ants to the locomotion of lizards. Here, we developed a series of decision architectures inspired by the information exchange between a host or...

Optimal chordwise stiffness profiles of self-propelled flapping fins.

Bioinspiration & biomimetics
The versatility of fish to adapt to different swimming requirements is attributed to their complex muscular system. Fish modulate their fin stiffness and shape for maximized performance. In this paper, optimal chordwise stiffness profiles that maximi...

Machine learning approaches to personalize early prediction of asthma exacerbations.

Annals of the New York Academy of Sciences
Patient telemonitoring results in an aggregation of significant amounts of information about patient disease trajectory. However, the potential use of this information for early prediction of exacerbations in adult asthma patients has not been system...

Predictive time-series modeling using artificial neural networks for Linac beam symmetry: an empirical study.

Annals of the New York Academy of Sciences
Over half of cancer patients receive radiotherapy (RT) as partial or full cancer treatment. Daily quality assurance (QA) of RT in cancer treatment closely monitors the performance of the medical linear accelerator (Linac) and is critical for continuo...

Using Data From the Microsoft Kinect 2 to Quantify Upper Limb Behavior: A Feasibility Study.

IEEE journal of biomedical and health informatics
The objective of this study was to assess whether the novel application of a machine learning approach to data collected from the Microsoft Kinect 2 (MK2) could be used to classify differing levels of upper limb impairment. Twenty-four healthy subjec...

Modeling biochemical pathways in the gene ontology.

Database : the journal of biological databases and curation
The concept of a biological pathway, an ordered sequence of molecular transformations, is used to collect and represent molecular knowledge for a broad span of organismal biology. Representations of biomedical pathways typically are rich but idiosync...