AIMC Topic: Animals

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Nuquantus: Machine learning software for the characterization and quantification of cell nuclei in complex immunofluorescent tissue images.

Scientific reports
Determination of fundamental mechanisms of disease often hinges on histopathology visualization and quantitative image analysis. Currently, the analysis of multi-channel fluorescence tissue images is primarily achieved by manual measurements of tissu...

The Disease Portals, disease-gene annotation and the RGD disease ontology at the Rat Genome Database.

Database : the journal of biological databases and curation
The Rat Genome Database (RGD;http://rgd.mcw.edu/) provides critical datasets and software tools to a diverse community of rat and non-rat researchers worldwide. To meet the needs of the many users whose research is disease oriented, RGD has created a...

Models of visual categorization.

Wiley interdisciplinary reviews. Cognitive science
Visual categorization refers to our ability to organize objects and visual scenes into discrete categories. It is an essential skill as it allows us to distinguish friend from foe or edible versus poisonous food. Understanding how the visual system c...

Rehabilitative Soft Exoskeleton for Rodents.

IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society
Robotic exoskeletons provide programmable, consistent and controllable active therapeutic assistance to patients with neurological disorders. Here we introduce a prototype and preliminary experimental evaluation of a rehabilitative gait exoskeleton t...

Comparison of module detection algorithms in protein networks and investigation of the biological meaning of predicted modules.

BMC bioinformatics
BACKGROUND: It is generally acknowledged that a functional understanding of a biological system can only be obtained by an understanding of the collective of molecular interactions in form of biological networks. Protein networks are one particular n...

Localizing Tortoise Nests by Neural Networks.

PloS one
The goal of this research is to recognize the nest digging activity of tortoises using a device mounted atop the tortoise carapace. The device classifies tortoise movements in order to discriminate between nest digging, and non-digging activity (spec...

Optimized Repopulation of Tendon Hydrogel: Synergistic Effects of Growth Factor Combinations and Adipose-Derived Stem Cells.

Hand (New York, N.Y.)
Tendon-derived extracellular matrix (ECM) hydrogel has been shown to augment tendon healing in vivo. We hypothesized that reseeding of the gel with adipose-derived stem cells (ASCs) could further assist repopulation of the gel and that combinations ...

A simple generative model of the mouse mesoscale connectome.

eLife
Recent technological advances now allow for the collection of vast data sets detailing the intricate neural connectivity patterns of various organisms. Oh et al. (2014) recently published the most complete description of the mouse mesoscale connectom...

REGene: a literature-based knowledgebase of animal regeneration that bridge tissue regeneration and cancer.

Scientific reports
Regeneration is a common phenomenon across multiple animal phyla. Regeneration-related genes (REGs) are critical for fundamental cellular processes such as proliferation and differentiation. Identification of REGs and elucidating their functions may ...

Editorial overview: Neurobiology of cognitive behavior: Complexity of neural computation and cognition.

Current opinion in neurobiology
We live in an age when our phones incorporate real-time updates on traffic and subway delays to help us navigate complex urban environments, vacuum cleaning robots map the layout of our apartments to optimize their cleaning strategies, and cars are b...