AIMC Topic: Brain Neoplasms

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Efficient, high-performance semantic segmentation using multi-scale feature extraction.

PloS one
The success of deep learning in recent years has arguably been driven by the availability of large datasets for training powerful predictive algorithms. In medical applications however, the sensitive nature of the data limits the collection and excha...

MRI pulse sequence integration for deep-learning-based brain metastases segmentation.

Medical physics
PURPOSE: Magnetic resonance (MR) imaging is an essential diagnostic tool in clinical medicine. Recently, a variety of deep-learning methods have been applied to segmentation tasks in medical images, with promising results for computer-aided diagnosis...

Feature-fusion improves MRI single-shot deep learning detection of small brain metastases.

Journal of neuroimaging : official journal of the American Society of Neuroimaging
BACKGROUND AND PURPOSE: To examine whether feature-fusion (FF) method improves single-shot detector's (SSD's) detection of small brain metastases on contrast-enhanced (CE) T1-weighted MRI.

Radiomics machine learning study with a small sample size: Single random training-test set split may lead to unreliable results.

PloS one
This study aims to determine how randomly splitting a dataset into training and test sets affects the estimated performance of a machine learning model and its gap from the test performance under different conditions, using real-world brain tumor rad...

Classification of glioblastoma versus primary central nervous system lymphoma using convolutional neural networks.

Scientific reports
A subset of primary central nervous system lymphomas (PCNSL) are difficult to distinguish from glioblastoma multiforme (GBM) on magnetic resonance imaging (MRI). We developed a convolutional neural network (CNN) to distinguish these tumors on contras...

neoDL: a novel neoantigen intrinsic feature-based deep learning model identifies IDH wild-type glioblastomas with the longest survival.

BMC bioinformatics
BACKGROUND: Neoantigen based personalized immune therapies achieve promising results in melanoma and lung cancer, but few neoantigen based models perform well in IDH wild-type GBM, and the association between neoantigen intrinsic features and prognos...

Automatic multiclass intramedullary spinal cord tumor segmentation on MRI with deep learning.

NeuroImage. Clinical
Spinal cord tumors lead to neurological morbidity and mortality. Being able to obtain morphometric quantification (size, location, growth rate) of the tumor, edema, and cavity can result in improved monitoring and treatment planning. Such quantificat...

Automatic cell counting from stimulated Raman imaging using deep learning.

PloS one
In this paper, we propose an automatic cell counting framework for stimulated Raman scattering (SRS) images, which can assist tumor tissue characteristic analysis, cancer diagnosis, and surgery planning processes. SRS microscopy has promoted tumor di...

Distinct tumor signatures using deep learning-based characterization of the peritumoral microenvironment in glioblastomas and brain metastases.

Scientific reports
Tumor types are classically distinguished based on biopsies of the tumor itself, as well as a radiological interpretation using diverse MRI modalities. In the current study, the overarching goal is to demonstrate that primary (glioblastomas) and seco...

Hahn-PCNN-CNN: an end-to-end multi-modal brain medical image fusion framework useful for clinical diagnosis.

BMC medical imaging
BACKGROUND: In medical diagnosis of brain, the role of multi-modal medical image fusion is becoming more prominent. Among them, there is no lack of filtering layered fusion and newly emerging deep learning algorithms. The former has a fast fusion spe...