AIMC Topic: Cytoplasm
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LncLocation: Efficient Subcellular Location Prediction of Long Non-Coding RNA-Based Multi-Source Heterogeneous Feature Fusion.
International journal of molecular sciences
Oct 1, 2020
Recent studies uncover that subcellular location of long non-coding RNAs (lncRNAs) can provide significant information on its function. Due to the lack of experimental data, the number of lncRNAs is very limited, experimentally verified subcellular l...
Convolutional neural network for cell classification using microscope images of intracellular actin networks.
PloS one
Mar 13, 2019
Automated cell classification is an important yet a challenging computer vision task with significant benefits to biomedicine. In recent years, there have been several studies attempted to build an artificial intelligence-based cell classifier using ...
Automation
Pattern Recognition, Automated
Actins
Cytoplasm
Models, Statistical
MCF-7 Cells
Microscopy, Fluorescence
Breast
Cytoskeleton
Machine Learning
Algorithms
Female
Reproducibility of Results
Breast Neoplasms
Cell Line, Tumor
Image Processing, Computer-Assisted
Cell Line
Humans
Neural Networks, Computer
L1 Cell Adhesion Molecule and Its Soluble Form sL1 Exhibit Poor Prognosis in Primary Breast Cancer Patients.
Clinical breast cancer
Dec 28, 2017
INTRODUCTION: The L1 cell adhesion molecule (L1-CAM) and its soluble form sL1 play a prominent role in invasion and metastasis in several cancers. However, its association with breast cancer is still unclear.
EffectorP: predicting fungal effector proteins from secretomes using machine learning.
The New phytologist
Dec 17, 2015
Eukaryotic filamentous plant pathogens secrete effector proteins that modulate the host cell to facilitate infection. Computational effector candidate identification and subsequent functional characterization delivers valuable insights into plant-pat...
An Intelligent Decision Support System for Leukaemia Diagnosis using Microscopic Blood Images.
Scientific reports
Oct 9, 2015
This research proposes an intelligent decision support system for acute lymphoblastic leukaemia diagnosis from microscopic blood images. A novel clustering algorithm with stimulating discriminant measures (SDM) of both within- and between-cluster sca...
Does artificial intelligence redefine nuclear-to-cytoplasmic ratio threshold for diagnosing high-grade urothelial carcinoma?
Cancer cytopathology
May 1, 2025
BACKGROUND: The Paris System (TPS) introduced standardized nuclear-to-cytoplasmic (N/C) ratio thresholds for urine cytology to improve high-grade urothelial carcinoma (HGUC) detection, but these criteria remain subjective. This study used AIxURO, an ...
Deep generative model for protein subcellular localization prediction.
Briefings in bioinformatics
Mar 4, 2025
Protein sequence not only determines its structure but also provides important clues of its subcellular localization. Although a series of artificial intelligence models have been reported to predict protein subcellular localization, most of them pro...
Automatic recognition of white blood cell images with memory efficient superpixel metric GNN: SMGNN.
Mathematical biosciences and engineering : MBE
Jan 10, 2024
An automatic recognizing system of white blood cells can assist hematologists in the diagnosis of many diseases, where accuracy and efficiency are paramount for computer-based systems. In this paper, we presented a new image processing system to reco...
mRNALoc: a novel machine-learning based in-silico tool to predict mRNA subcellular localization.
Nucleic acids research
Jul 2, 2020
Recent evidences suggest that the localization of mRNAs near the subcellular compartment of the translated proteins is a more robust cellular tool, which optimizes protein expression, post-transcriptionally. Retention of mRNA in the nucleus can regul...
[Enhancement of Coprinus cinereus peroxidase in Pichia pastoris by co-expression chaperone PDI and Ero1].
Sheng wu gong cheng xue bao = Chinese journal of biotechnology
Dec 1, 2015
The 1,095 bp gene encoding peroxidase from Coprinus cinereus was synthesized and integrated into the genome of Pichia pastoris with a highly inducible alcohol oxidase. The recombinant CiP (rCiP) fused with the a-mating factor per-pro leader sequence ...
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