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Automated oral squamous cell carcinoma identification using shape, texture and color features of whole image strips.

Tissue & cell
Despite profound knowledge of the incidence of oral cancers and a large body of research beyond it, it continues to beat diagnosis and treatment management. Post physical observation by clinicians, a biopsy is a gold standard for accurate detection o...

Graph temporal ensembling based semi-supervised convolutional neural network with noisy labels for histopathology image analysis.

Medical image analysis
Although convolutional neural networks have achieved tremendous success on histopathology image classification, they usually require large-scale clean annotated data and are sensitive to noisy labels. Unfortunately, labeling large-scale images is lab...

Glycemic-aware metrics and oversampling techniques for predicting blood glucose levels using machine learning.

PloS one
Techniques using machine learning for short term blood glucose level prediction in patients with Type 1 Diabetes are investigated. This problem is significant for the development of effective artificial pancreas technology so accurate alerts (e.g. hy...

DeepMiR2GO: Inferring Functions of Human MicroRNAs Using a Deep Multi-Label Classification Model.

International journal of molecular sciences
MicroRNAs (miRNAs) are a highly abundant collection of functional non-coding RNAs involved in cellular regulation and various complex human diseases. Although a large number of miRNAs have been identified, most of their physiological functions remain...

Dissection of gene expression datasets into clinically relevant interaction signatures via high-dimensional correlation maximization.

Nature communications
Gene expression is controlled by many simultaneous interactions, frequently measured collectively in biology and medicine by high-throughput technologies. It is a highly challenging task to infer from these data the generating effects and cooperating...

DeNTNet: Deep Neural Transfer Network for the detection of periodontal bone loss using panoramic dental radiographs.

Scientific reports
In this study, a deep learning-based method for developing an automated diagnostic support system that detects periodontal bone loss in the panoramic dental radiographs is proposed. The presented method called DeNTNet not only detects lesions but als...

Learning a functional grammar of protein domains using natural language word embedding techniques.

Proteins
In this paper, using Word2vec, a widely-used natural language processing method, we demonstrate that protein domains may have a learnable implicit semantic "meaning" in the context of their functional contributions to the multi-domain proteins in whi...

Regularized siamese neural network for unsupervised outlier detection on brain multiparametric magnetic resonance imaging: Application to epilepsy lesion screening.

Medical image analysis
In this study, we propose a novel anomaly detection model targeting subtle brain lesions in multiparametric MRI. To compensate for the lack of annotated data adequately sampling the heterogeneity of such pathologies, we cast this problem as an outlie...