AIMC Topic: Mice

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Magnetically Actuated Heterogeneous Microcapsule-Robot for the Construction of 3D Bioartificial Architectures.

ACS applied materials & interfaces
Core-shell microcapsules as one type of the most attractive carriers and reactors have been widely applied in the fields of drug screening and tissue engineering owing to their excellent biocompatibility and semi-permeability. Yet, the spatial organi...

3D Neuron Reconstruction in Tangled Neuronal Image With Deep Networks.

IEEE transactions on medical imaging
Digital reconstruction or tracing of 3D neuron is essential for understanding the brain functions. While existing automatic tracing algorithms work well for the clean neuronal image with a single neuron, they are not robust to trace the neuron surrou...

Enabling full-length evolutionary profiles based deep convolutional neural network for predicting DNA-binding proteins from sequence.

Proteins
Sequence based DNA-binding protein (DBP) prediction is a widely studied biological problem. Sliding windows on position specific substitution matrices (PSSMs) rows predict DNA-binding residues well on known DBPs but the same models cannot be applied ...

Assessing micrometastases as a target for nanoparticles using 3D microscopy and machine learning.

Proceedings of the National Academy of Sciences of the United States of America
Metastasis of solid tumors is a key determinant of cancer patient survival. Targeting micrometastases using nanoparticles could offer a way to stop metastatic tumor growth before it causes excessive patient morbidity. However, nanoparticle delivery t...

Alkaline conditions better extract anti-inflammatory polysaccharides from winemaking by-products.

Food research international (Ottawa, Ont.)
Winemaking generates large amounts of by-products, a well recognized source of phenolic compounds. However, less attention has been paid to the polysaccharide-rich fraction (PRF) and effects of fractionation techniques on its potential bioactivity. T...

Morphology-based classification of mycobacteria-infected macrophages with convolutional neural network: reveal EsxA-induced morphologic changes indistinguishable by naked eyes.

Translational research : the journal of laboratory and clinical medicine
EsxA is an essential virulence factor for Mycobacterium tuberculosis (Mtb) pathogenesis as well as an important biomarker for Mtb detection. In this study, we use light microscopy and deep learning-based image analysis to classify the morphologic cha...

Prototyping a memristive-based device to analyze neuronal excitability.

Biophysical chemistry
Many efforts have been spent in the last decade for the development of nanoscale synaptic devices integrated into neuromorphic circuits, trying to emulate the behavior of natural synapses. The study of brain properties with the standard approaches ba...

Identifying pre-disease signals before metabolic syndrome in mice by dynamical network biomarkers.

Scientific reports
The establishment of new therapeutic strategies for metabolic syndrome is urgently needed because metabolic syndrome, which is characterized by several disorders, such as hypertension, increases the risk of lifestyle-related diseases. One approach is...

Detection and Classification of Novel Renal Histologic Phenotypes Using Deep Neural Networks.

The American journal of pathology
With the advent and increased accessibility of deep neural networks (DNNs), complex properties of histologic images can be rigorously and reproducibly quantified. We used DNN-based transfer learning to analyze histologic images of periodic acid-Schif...

Analysis and prediction of human acetylation using a cascade classifier based on support vector machine.

BMC bioinformatics
BACKGROUND: Acetylation on lysine is a widespread post-translational modification which is reversible and plays a crucial role in some biological activities. To better understand the mechanism, it is necessary to identify acetylation sites in protein...