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Microsatellite Instability

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MSIpred: a python package for tumor microsatellite instability classification from tumor mutation annotation data using a support vector machine.

Scientific reports
Microsatellite instability (MSI) is characterized by high degree of polymorphism in microsatellite lengths due to deficiency in mismatch repair (MMR) system. MSI is associated with several tumor types and its status can be considered as an important ...

Computed Tomography-Based Radiomic Features Could Potentially Predict Microsatellite Instability Status in Stage II Colorectal Cancer: A Preliminary Study.

Academic radiology
RATIONALE AND OBJECTIVES: To investigate whether quantitative radiomics features extracted from computed tomography (CT) can predict microsatellite instability (MSI) status in an Asian cohort of patients with stage Ⅱ colorectal cancer (CRC).

Deep learning can predict microsatellite instability directly from histology in gastrointestinal cancer.

Nature medicine
Microsatellite instability determines whether patients with gastrointestinal cancer respond exceptionally well to immunotherapy. However, in clinical practice, not every patient is tested for MSI, because this requires additional genetic or immunohis...

A gastric cancer LncRNAs model for MSI and survival prediction based on support vector machine.

BMC genomics
BACKGROUND: Recent studies have shown that long non-coding RNAs (lncRNAs) play a crucial role in the induction of cancer through epigenetic regulation, transcriptional regulation, post-transcriptional regulation and other aspects, thus participating ...