AIMC Topic: Datasets as Topic

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Artificial intelligence and the hunt for immunological disorders.

Current opinion in allergy and clinical immunology
PURPOSE OF REVIEW: Artificial intelligence has pervasively transformed many industries and is beginning to shape medical practice. New use cases are being identified in subspecialty domains of medicine and, in particular, application of artificial in...

The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for clinical records.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task track 3, focused on medical concept normalization (MCN) in clinical records. This track aimed to assess the state of the art...

Can Unified Medical Language System-based semantic representation improve automated identification of patient safety incident reports by type and severity?

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: The study sought to evaluate the feasibility of using Unified Medical Language System (UMLS) semantic features for automated identification of reports about patient safety incidents by type and severity.

Predicting bacterial virulence factors - evaluation of machine learning and negative data strategies.

Briefings in bioinformatics
Bacterial proteins dubbed virulence factors (VFs) are a highly diverse group of sequences, whose only obvious commonality is the very property of being, more or less directly, involved in virulence. It is therefore tempting to speculate whether their...

Deep learning based prediction of reversible HAT/HDAC-specific lysine acetylation.

Briefings in bioinformatics
Protein lysine acetylation regulation is an important molecular mechanism for regulating cellular processes and plays critical physiological and pathological roles in cancers and diseases. Although massive acetylation sites have been identified throu...

TMLRpred: A machine learning classification model to distinguish reversible EGFR double mutant inhibitors.

Chemical biology & drug design
The EGFR is a clinically important therapeutic drug target in lung cancer. The first-generation tyrosine kinase inhibitors used in clinics are effective against L858R-mutated EGFR. However, relapse of the disease due to the presence of resistant muta...

Constructing co-occurrence network embeddings to assist association extraction for COVID-19 and other coronavirus infectious diseases.

Journal of the American Medical Informatics Association : JAMIA
OBJECTIVE: As coronavirus disease 2019 (COVID-19) started its rapid emergence and gradually transformed into an unprecedented pandemic, the need for having a knowledge repository for the disease became crucial. To address this issue, a new COVID-19 m...

Decoding spectro-temporal representation for motor imagery recognition using ECoG-based brain-computer interfaces.

Journal of integrative neuroscience
One of the challenges in brain-computer interface systems is obtaining motor imagery recognition from brain activities. Brain-signal decoding robustness and system performance improvement during the motor imagery process are two of the essential issu...

Prediction of condition-specific regulatory genes using machine learning.

Nucleic acids research
Recent advances in genomic technologies have generated data on large-scale protein-DNA interactions and open chromatin regions for many eukaryotic species. How to identify condition-specific functions of transcription factors using these data has bec...