AI Medical Compendium Topic

Explore the latest research on artificial intelligence and machine learning in medicine.

Whole Genome Sequencing

Showing 61 to 67 of 67 articles

Clear Filters

Predicting Host Association for Shiga Toxin-Producing E. coli Serogroups by Machine Learning.

Methods in molecular biology (Clifton, N.J.)
Escherichia coli is a species of bacteria that can be present in a wide variety of mammalian hosts and potentially soil environments. E. coli has an open genome and can show considerable diversity in gene content between isolates. It is a reasonable ...

A guide to machine learning for bacterial host attribution using genome sequence data.

Microbial genomics
With the ever-expanding number of available sequences from bacterial genomes, and the expectation that this data type will be the primary one generated from both diagnostic and research laboratories for the foreseeable future, then there is both an o...

Encoding Clinical Data with the Human Phenotype Ontology for Computational Differential Diagnostics.

Current protocols in human genetics
The Human Phenotype Ontology (HPO) is a standardized set of phenotypic terms that are organized in a hierarchical fashion. It is a widely used resource for capturing human disease phenotypes for computational analysis to support differential diagnost...

Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources.

Nucleic acids research
The Human Phenotype Ontology (HPO)-a standardized vocabulary of phenotypic abnormalities associated with 7000+ diseases-is used by thousands of researchers, clinicians, informaticians and electronic health record systems around the world. Its detaile...

A pan-genome-based machine learning approach for predicting antimicrobial resistance activities of the Escherichia coli strains.

Bioinformatics (Oxford, England)
MOTIVATION: Antimicrobial resistance (AMR) is becoming a huge problem in both developed and developing countries, and identifying strains resistant or susceptible to certain antibiotics is essential in fighting against antibiotic-resistant pathogens....