AI Medical Compendium Topic:
Biomarkers, Tumor

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Machine learning of serum metabolic patterns encodes early-stage lung adenocarcinoma.

Nature communications
Early cancer detection greatly increases the chances for successful treatment, but available diagnostics for some tumours, including lung adenocarcinoma (LA), are limited. An ideal early-stage diagnosis of LA for large-scale clinical use must address...

Hypothesis-free deep survival learning applied to the tumour microenvironment in gastric cancer.

The journal of pathology. Clinical research
The biological complexity reflected in histology images requires advanced approaches for unbiased prognostication. Machine learning and particularly deep learning methods are increasingly applied in the field of digital pathology. In this study, we p...

Serum markers improve current prediction of metastasis development in early-stage melanoma patients: a machine learning-based study.

Molecular oncology
Metastasis development represents an important threat for melanoma patients, even when diagnosed at early stages and upon removal of the primary tumor. In this scenario, determination of prognostic biomarkers would be of great interest. Serum contain...

Integrating spatial gene expression and breast tumour morphology via deep learning.

Nature biomedical engineering
Spatial transcriptomics allows for the measurement of RNA abundance at a high spatial resolution, making it possible to systematically link the morphology of cellular neighbourhoods and spatially localized gene expression. Here, we report the develop...

Radiomics in neuro-oncology: Basics, workflow, and applications.

Methods (San Diego, Calif.)
Over the last years, the amount, variety, and complexity of neuroimaging data acquired in patients with brain tumors for routine clinical purposes and the resulting number of imaging parameters have substantially increased. Consequently, a timely and...

Prediction of breast cancer proteins involved in immunotherapy, metastasis, and RNA-binding using molecular descriptors and artificial neural networks.

Scientific reports
Breast cancer (BC) is a heterogeneous disease where genomic alterations, protein expression deregulation, signaling pathway alterations, hormone disruption, ethnicity and environmental determinants are involved. Due to the complexity of BC, the predi...

Combining gene expression profiling and machine learning to diagnose B-cell non-Hodgkin lymphoma.

Blood cancer journal
Non-Hodgkin B-cell lymphomas (B-NHLs) are a highly heterogeneous group of mature B-cell malignancies. Their classification thus requires skillful evaluation by expert hematopathologists, but the risk of error remains higher in these tumors than in ma...

Prognostic Significance of Immune Cell Populations Identified by Machine Learning in Colorectal Cancer Using Routine Hematoxylin and Eosin-Stained Sections.

Clinical cancer research : an official journal of the American Association for Cancer Research
PURPOSE: Although high T-cell density is a well-established favorable prognostic factor in colorectal cancer, the prognostic significance of tumor-associated plasma cells, neutrophils, and eosinophils is less well-defined.