AIMC Topic: Peptide Fragments

Clear Filters Showing 21 to 30 of 75 articles

Deep learning-based NT-proBNP prediction from the ECG for risk assessment in the community.

Clinical chemistry and laboratory medicine
OBJECTIVES: The biomarker N-terminal pro B-type natriuretic peptide (NT-proBNP) has predictive value for identifying individuals at risk for cardiovascular disease (CVD). However, it is not widely used for screening in the general population, potenti...

Aggregation-induced electrochemiluminescence enhancement of Ag-MOG for amyloid β 42 sensing.

Analytica chimica acta
This study aimed to introduce an immunosensor for measuring amyloid β 42 (Aβ) levels by aggregation-induced enhanced electrochemiluminescence (ECL). Metal-organic gels (MOGs) are novel soft materials with advantages such as high gel stability, good l...

Interpretable Machine Learning of Amino Acid Patterns in Proteins: A Statistical Ensemble Approach.

Journal of chemical theory and computation
Explainable and interpretable unsupervised machine learning helps one to understand the underlying structure of data. We introduce an ensemble analysis of machine learning models to consolidate their interpretation. Its application shows that restric...

Metastable alpha-rich and beta-rich conformations of small Aβ42 peptide oligomers.

Proteins
Probing the structures of amyloid-β (Aβ) peptides in the early steps of aggregation is extremely difficult experimentally and computationally. Yet, this knowledge is extremely important as small oligomers are the most toxic species. Experiments and s...

Deep-Learning-Assisted Stratification of Amyloid Beta Mutants Using Drying Droplet Patterns.

Advanced materials (Deerfield Beach, Fla.)
The development of simple and accurate methods to predict mutations in proteins remains an unsolved challenge in modern biochemistry. It is discovered that critical information about primary and secondary peptide structures can be inferred from the s...

Single-molecule fluorescence imaging and deep learning reveal highly heterogeneous aggregation of amyloid-β 42.

Proceedings of the National Academy of Sciences of the United States of America
Polymorphism in the structure of amyloid fibrils suggests the existence of many different assembly pathways. Characterization of this heterogeneity is the key to understanding the aggregation mechanism and toxicity, but in practice it is extremely di...

DeepLC can predict retention times for peptides that carry as-yet unseen modifications.

Nature methods
The inclusion of peptide retention time prediction promises to remove peptide identification ambiguity in complex liquid chromatography-mass spectrometry identification workflows. However, due to the way peptides are encoded in current prediction mod...

iBitter-Fuse: A Novel Sequence-Based Bitter Peptide Predictor by Fusing Multi-View Features.

International journal of molecular sciences
Accurate identification of bitter peptides is of great importance for better understanding their biochemical and biophysical properties. To date, machine learning-based methods have become effective approaches for providing a good avenue for identify...

Prediction of Incident Atrial Fibrillation in Chronic Kidney Disease: The Chronic Renal Insufficiency Cohort Study.

Clinical journal of the American Society of Nephrology : CJASN
BACKGROUND AND OBJECTIVES: Atrial fibrillation (AF) is common in CKD and associated with poor kidney and cardiovascular outcomes. Prediction models developed using novel methods may be useful to identify patients with CKD at highest risk of incident ...