AIMC Topic: Genomics

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Bridging Genomic Research Disparities in Osteoporosis GWAS: Insights for Diverse Populations.

Current osteoporosis reports
PURPOSE OF REVIEW: Genome-wide association studies (GWAS) have significantly advanced osteoporosis research by identifying genetic loci associated with bone mineral density (BMD) and fracture risk. However, disparities persist due to the underreprese...

Beyond genomics: artificial intelligence-powered diagnostics for indeterminate thyroid nodules-a systematic review and meta-analysis.

Frontiers in endocrinology
INTRODUCTION: In recent years, artificial intelligence (AI) tools have become widely studied for thyroid ultrasonography (USG) classification. The real-world applicability of these developed tools as pre-operative diagnostic aids is limited due to mo...

Recent advances in omics and the integration of multi-omics in osteoarthritis research.

Arthritis research & therapy
Osteoarthritis (OA) is a complex disorder driven by the combination of environmental and genetic factors. Given its high global prevalence and heterogeneity, developing effective and personalized treatment methods is crucial. This requires identifyin...

Modality-Aware Discriminative Fusion Network for Integrated Analysis of Brain Imaging Genomics.

IEEE transactions on neural networks and learning systems
Mild cognitive impairment (MCI) represents an early stage of Alzheimer's disease (AD), characterized by subtle clinical symptoms that pose challenges for accurate diagnosis. The quest for the identification of MCI individuals has highlighted the impo...

Ge-SAND: an explainable deep learning-driven framework for disease risk prediction by uncovering complex genetic interactions in parallel.

BMC genomics
BACKGROUND: Accurate genetic risk prediction and understanding the mechanisms underlying complex diseases are essential for effective intervention and precision medicine. However, current methods often struggle to capture the intricate and subtle gen...

Transcripts and genomic intervals associated with variation in metabolite abundance in maize leaves under field conditions.

BMC genomics
Plants exhibit extensive environment-dependent intraspecific metabolic variation, which likely plays a role in determining variation in whole plant phenotypes. However, much of the work seeking to use natural variation to link genes and transcript's ...

Clinical Validation of a Noninvasive Multi-Omics Method for Multicancer Early Detection in Retrospective and Prospective Cohorts.

The Journal of molecular diagnostics : JMD
Recent studies highlight the promise of blood-based multicancer early detection (MCED) tests for identifying asymptomatic patients with cancer. However, most focus on a single cancer hallmark, thus limiting effectiveness because of cancer's heterogen...

Comparative examination of the chemistry and biology of AI-driven gold NPs in Theranostics: New insights into biosensing, bioimaging, genomics, diagnostics, and therapy.

Nanomedicine : nanotechnology, biology, and medicine
Integrating artificial intelligence (AI) with nanomedicine is transforming Theranostics, driving advances in biosensing, bioimaging, genomics, diagnostics, and treatment. This review highlights the latest advancements in AI-driven nanomedicine, focus...

Breaking down data silos across companies to train genome-wide predictions: A feasibility study in wheat.

Plant biotechnology journal
Big data, combined with artificial intelligence (AI) techniques, holds the potential to significantly enhance the accuracy of genome-wide predictions. Motivated by the success reported for wheat hybrids, we extended the scope to inbred lines by integ...

EBMGP: a deep learning model for genomic prediction based on Elastic Net feature selection and bidirectional encoder representations from transformer's embedding and multi-head attention pooling.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik
Enhancing early selection through genomic estimated breeding values is pivotal for reducing generation intervals and accelerating breeding programs. Recently, deep learning (DL) approaches have gained prominence in genomic prediction (GP). Here, we i...