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Oligonucleotide Array Sequence Analysis

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Machine learning workflows to estimate class probabilities for precision cancer diagnostics on DNA methylation microarray data.

Nature protocols
DNA methylation data-based precision cancer diagnostics is emerging as the state of the art for molecular tumor classification. Standards for choosing statistical methods with regard to well-calibrated probability estimates for these typically highly...

Stable gene selection by self-representation method in fuzzy sample classification.

Medical & biological engineering & computing
In recent years, microarray technology and gene expression profiles have been widely used to detect, predict, or classify the samples of various diseases. The presence of large genes in these profiles and the small number of samples are known challen...

Chaotic emperor penguin optimised extreme learning machine for microarray cancer classification.

IET systems biology
Microarray technology plays a significant role in cancer classification, where a large number of genes and samples are simultaneously analysed. For the efficient analysis of the microarray data, there is a great demand for the development of intellig...

Classification of Microarray Gene Expression Data Using an Infiltration Tactics Optimization (ITO) Algorithm.

Genes
A number of different feature selection and classification techniques have been proposed in literature including parameter-free and parameter-based algorithms. The former are quick but may result in local maxima while the latter use dataset-specific ...

Identification of early liver toxicity gene biomarkers using comparative supervised machine learning.

Scientific reports
Screening agrochemicals and pharmaceuticals for potential liver toxicity is required for regulatory approval and is an expensive and time-consuming process. The identification and utilization of early exposure gene signatures and robust predictive mo...

Identification of drug combinations on the basis of machine learning to maximize anti-aging effects.

PloS one
Aging is a multifactorial process that involves numerous genetic changes, so identifying anti-aging agents is quite challenging. Age-associated genetic factors must be better understood to search appropriately for anti-aging agents. We utilized an ag...